myRT

myRT report for GCA_902386825.1_UHGG_MGYG-HGUT-02412

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Seq: CABMKE010000002.1 (71800 bp)
Overview 1 RT 1: 58245-66248 bp Neighborhood of RT #1 [58245, 66253] RVT-AbiP2 DUF1810 DUF4968 PLN02763 GH31_CPE1046 DUF5110 FN3 F5_F8_type_C Dockerin_II Type_III_cohesin_like Feature: gene Location: 58245-59636 bp Feature: gene Location: 59741-59977 bp Feature: gene Location: 60013-61731 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 60514-60970 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 6051 4-60970 bp Feature: gene Location: 61844-62263 bp Feature: domain Description: DUF1810 Location: 61853-62255 bp Feature: domain Description: DUF1 81 0 Location: 61 853-62255 bp Feature: gene Location: 62345-66253 bp Feature: domain Description: DUF4968 Location: 62552-62837 bp Feature: domain Description: DUF4968 Location: 62552-62837 bp Feature: domain Description: PLN02763 Location: 62846-62996 bp Feature: domain Description: PLN02763 Location: 62846-62996 bp Feature: domain Description: GH31_CPE1046 Location: 63194-64331 bp Feature: domain Description: GH31 _CPE1 046 Location: 631 94-64331 bp Feature: domain Description: DUF5110 Location: 64475-64685 bp Feature: domain Description: DUF51 1 0 Location: 64475-64685 bp Feature: domain Description: FN3 Location: 65030-65222 bp Feature: domain Description: FN3 Location: 65030-65222 bp Feature: domain Description: F5_F8_type_C Location: 65273-65612 bp Feature: domain Description: F5_F8_type_C Location: 65273-6561 2 bp Feature: domain Description: Dockerin_II Location: 65675-65837 bp Feature: domain Description: Dockerin_II Location: 65675-65837 bp Feature: domain Description: Type_III_cohesin_like Location: 65879-66248 bp Feature: domain Description: Type_III_cohesin_like Location: 65879-66248 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiP2, DUF1810 (pfam08837), DUF4968 (pfam16338), PLN02763 (hydrolase, hydrolyzing O-glycosyl compounds), GH31_CPE1046 (cd06596), DUF5110 (pfam17137), FN3 (smart00060), F5_F8_type_C (pfam00754), Dockerin_II (cd14254), Type_III_cohesin_like (cd08759)

Seq: CABMKE010000016.1 (765597 bp)
Overview 1 RT 1: 546820-554482 bp Neighborhood of RT #1 [546820, 554520] RVT-DGRs ThyA Feature: gene Location: 546820-550890 bp Feature: gene Location: 550909-553041 bp Feature: gene Location: 553085-553345 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 553100-553298 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 553100-5532 98 bp Feature: gene Location: 553522-553770 bp Feature: gene Location: 553882-554520 bp Feature: domain Description: ThyA Location: 553888-554482 bp Feature: domain Description: ThyA Location: 553888-554482 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, ThyA (COG0207)

Seq: CABMKE010000015.1 (349035 bp)
Overview 1 RT 1: 33195-44563 bp 2 RT 2: 158872-168088 bp Neighborhood of RT #1 [33195, 44598] DUF1896 N6_Mtase COG4646 RVT_N RVT-GII YkfC PRK13351 PRK13351 Neighborhood of RT #2 [158872, 168114] DUF1896 COG4646 RVT_N RVT-GII YkfC HTH_XRE Feature: gene Location: 33195-33782 bp Feature: domain Description: DUF1896 Location: 33360-33780 bp Feature: domain Description: DUF1896 Location: 3 3 3 60-3 3 780 bp Feature: gene Location: 33772-38460 bp Feature: domain Description: N6_Mtase Location: 34084-34687 bp Feature: domain Description: N6_Mtase Location: 3 4084-3 4687 bp Feature: domain Description: COG4646 Location: 36016-38077 bp Feature: domain Description: COG4646 Location: 3 6016-3 8077 bp Feature: gene Location: 39066-40802 bp Feature: domain Description: RVT_N Location: 39189-39432 bp Feature: domain Description: RVT_N Location: 3 9189-3 943 2 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39477-40125 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 9477-40125 bp Feature: domain Description: YkfC Location: 40335-40425 bp Feature: domain Description: YkfC Location: 403 3 5-40425 bp Feature: gene Location: 40756-42069 bp Feature: gene Location: 42727-44598 bp Feature: domain Description: PRK13351 Location: 42730-43198 bp Feature: domain Description: PRK13 3 51 Location: 4273 0-43 198 bp Feature: domain Description: PRK13351 Location: 43240-44563 bp Feature: domain Description: PRK13 3 51 Location: 43 240-44563 bp Feature: gene Location: 158872-159459 bp Feature: domain Description: DUF1896 Location: 159031-159454 bp Feature: domain Description: DUF1896 Location: 15903 1-159454 bp Feature: gene Location: 159446-164218 bp Feature: domain Description: COG4646 Location: 161834-163838 bp Feature: domain Description: COG4646 Location: 16183 4-163 83 8 bp Feature: gene Location: 164824-166560 bp Feature: domain Description: RVT_N Location: 164947-165190 bp Feature: domain Description: RVT_N Location: 164947-165190 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 165235-165883 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16523 5-165883 bp Feature: domain Description: YkfC Location: 166093-166183 bp Feature: domain Description: YkfC Location: 166093 -166183 bp Feature: gene Location: 166514-167716 bp Feature: gene Location: 167899-168114 bp Feature: domain Description: HTH_XRE Location: 167968-168088 bp Feature: domain Description: HTH_XRE Location: 167968-168088 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1896 (pfam08989), N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class ), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), PRK13351 (elongation factor G-like protein), HTH_XRE (smart00530)