myRT

myRT report for GCA_902459455.1_Q041.2

Download annotations/find similar RTs

Seq: CABPRN010000002.1 (452560 bp)
Overview 1 RT 1: 367712-377169 bp Neighborhood of RT #1 [367712, 377219] Acetyltransf_10 RVT-UG5 nitrilase SalY SalY LolD Feature: gene Location: 367712-368188 bp Feature: domain Description: Acetyltransf_10 Location: 367880-368156 bp Feature: domain Description: Acetyltransf_1 0 Location: 367880-3681 56 bp Feature: gene Location: 368237-369130 bp Feature: gene Location: 369169-372975 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 369745-370297 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 369745-370297 bp Feature: domain Description: nitrilase Location: 372196-372877 bp Feature: domain Description: nitrilase Location: 3721 96-372877 bp Feature: gene Location: 373103-376501 bp Feature: domain Description: SalY Location: 373526-375260 bp Feature: domain Description: SalY Location: 373526-375260 bp Feature: domain Description: SalY Location: 375326-376493 bp Feature: domain Description: SalY Location: 375326-376493 bp Feature: gene Location: 376518-377219 bp Feature: domain Description: LolD Location: 376533-377169 bp Feature: domain Description: LolD Location: 376533-3771 69 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Acetyltransf_10 (pfam13673), RVT-UG5, nitrilase (cl11424), SalY (COG0577), LolD (COG1136)

Seq: CABPRN010000023.1 (2481 bp)
Overview 1 RT 1: 570-2343 bp Neighborhood of RT #1 [570, 2372] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 570-2372 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 834-1653 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 834-1653 bp Feature: domain Description: Intron_maturas2 Location: 1731-2067 bp Feature: domain Description: Intron_maturas2 Location: 1731-2 067 bp Feature: domain Description: HNHc Note: nucleases Location: 2196-2343 bp Feature: domain Description: HNHc Note: nucleases Location: 2 196-2 343 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: CABPRN010000010.1 (54828 bp)
Overview 1 RT 1: 91-6624 bp Neighborhood of RT #1 [91, 6689] FlgJ Spr AAA_10 RVT-GII HNHc AAA_10 TcpE Feature: gene Location: 91-987 bp Feature: domain Description: FlgJ Location: 202-679 bp Feature: domain Description: FlgJ Location: 202-679 bp Feature: domain Description: Spr Location: 694-979 bp Feature: domain Description: Spr Location: 694-979 bp Feature: gene Location: 987-1361 bp Feature: domain Description: AAA_10 Location: 993-1317 bp Feature: domain Description: AAA_10 Location: 993 -13 17 bp Feature: gene Location: 1489-3420 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1816-2554 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1816-2554 bp Feature: domain Description: HNHc Note: nucleases Location: 3103-3268 bp Feature: domain Description: HNHc Note: nucleases Location: 3 103 -3 268 bp Feature: gene Location: 4095-6263 bp Feature: domain Description: AAA_10 Location: 5544-6246 bp Feature: domain Description: AAA_10 Location: 5544-6246 bp Feature: gene Location: 6321-6689 bp Feature: domain Description: TcpE Location: 6351-6624 bp Feature: domain Description: TcpE Location: 63 51-6624 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FlgJ (COG1705), Spr (COG0791), AAA_10 (pfam12846), RVT-GII, HNHc (smart00507), TcpE (pfam12648)