myRT

myRT report for GCA_902497355.1_P9094

Download annotations/find similar RTs

Seq: LR700153.1 (485080 bp)
Overview 1 RT 1: 157040-159552 bp Neighborhood of RT #1 [157040, 159552] Phage_XkdX RVT-DGRs RVT-DGRs Feature: gene Location: 157040-157189 bp Feature: domain Description: Phage_XkdX Location: 157064-157181 bp Feature: domain Description: Phage_XkdX Location: 1 57064-1 571 81 bp Feature: gene Location: 157191-157553 bp Feature: gene Location: 157490-158062 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 157502-157736 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 57502-1 57736 bp Feature: gene Location: 158074-158721 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 158257-158557 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 58257-1 58557 bp Feature: gene Location: 158853-159170 bp Feature: gene Location: 159007-159552 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_XkdX (pfam09693), RVT-DGRs

Seq: LR700154.1 (196741 bp)
Overview 1 RT 1: 160954-166917 bp Neighborhood of RT #1 [160954, 167024] Cyt_C5_DNA_methylase TraC-F-type RVT_N RVT-GII GIIM VirB4_CagE VirB4_CagE AAA_10 PrgI Feature: gene Location: 160954-161940 bp Feature: domain Description: Cyt_C5_DNA_methylase Location: 160972-161461 bp Feature: domain Description: Cyt_C5_DNA_methylase Location: 160972 -161461 bp Feature: gene Location: 161937-163157 bp Feature: domain Description: TraC-F-type Location: 162240-163020 bp Feature: domain Description: TraC-F-type Location: 162 2 40-16302 0 bp Feature: gene Location: 162943-164622 bp Feature: domain Description: RVT_N Location: 163021-163261 bp Feature: domain Description: RVT_N Location: 16302 1-1632 61 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 163309-163969 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 163309-163969 bp Feature: domain Description: GIIM Note: maturase Location: 164023-164257 bp Feature: domain Description: GIIM Note: maturase Location: 16402 3-1642 57 bp Feature: gene Location: 165158-166672 bp Feature: domain Description: VirB4_CagE Location: 165281-165713 bp Feature: domain Description: VirB4_CagE Location: 1652 81-165713 bp Feature: domain Description: VirB4_CagE Location: 165947-166445 bp Feature: domain Description: VirB4_CagE Location: 165947-166445 bp Feature: domain Description: AAA_10 Location: 166514-166658 bp Feature: domain Description: AAA_10 Location: 166514-166658 bp Feature: gene Location: 166629-167024 bp Feature: domain Description: PrgI Location: 166644-166917 bp Feature: domain Description: PrgI Location: 166644-166917 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cyt_C5_DNA_methylase (cl30459), TraC-F-type (TIGR02746), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), VirB4_CagE (TIGR00929), AAA_10 (pfam12846), PrgI (pfam12666)

Seq: LR700152.1 (1000905 bp)
Overview 1 RT 1: 548953-553884 bp Neighborhood of RT #1 [548953, 554645] CxxCG_CxxCG_HTH GepA RVT-UG2 HTH_XRE Eco57I Feature: gene Location: 548953-549339 bp Feature: gene Location: 549367-550362 bp Feature: domain Description: CxxCG_CxxCG_HTH Location: 549391-549766 bp Feature: domain Description: CxxCG_CxxCG_HTH Location: 5493 91-549766 bp Feature: domain Description: GepA Location: 549904-550291 bp Feature: domain Description: GepA Location: 549904-550291 bp Feature: gene Location: 550845-552074 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 550956-551787 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 550956-551787 bp Feature: gene Location: 552133-552435 bp Feature: domain Description: HTH_XRE Location: 552142-552313 bp Feature: domain Description: HTH_XRE Location: 552142-5523 13 bp Feature: gene Location: 552609-554645 bp Feature: domain Description: Eco57I Location: 553593-553884 bp Feature: domain Description: Eco57I Location: 553 593 -553 884 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CxxCG_CxxCG_HTH (TIGR03830), GepA (COG3600), RVT-UG2, HTH_XRE (smart00530), Eco57I (pfam07669)

Seq: LR700184.1 (2851 bp)
Overview 1 RT 1: 212-2849 bp Neighborhood of RT #1 [212, 2849] RVT-GII HNHc Feature: gene Location: 212-2128 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 536-1250 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 536-1250 bp Feature: domain Description: HNHc Note: nucleases Location: 1880-2051 bp Feature: domain Description: HNHc Note: nucleases Location: 1880-2051 bp Feature: gene Location: 2562-2849 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)