myRT

myRT report for GCA_902497575.1_Bsp_Wi_SOXsym_PacBio

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Seq: CABVGQ010000169.1 (129224 bp)
Overview 1 RT 1: 119978-123169 bp Neighborhood of RT #1 [119978, 123177] RVT-AbiP2 tldD Feature: gene Location: 119978-120889 bp Feature: gene Location: 121728-122033 bp Feature: gene Location: 122045-122335 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 122048-122255 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1 22048-1 22255 bp Feature: gene Location: 122717-122962 bp Feature: gene Location: 123046-123177 bp Feature: domain Description: tldD Location: 123049-123169 bp Feature: domain Description: tldD Location: 1 23049-1 231 69 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiP2, tldD (PRK10735)

Seq: CABVGQ010000062.1 (13811 bp)
Overview 1 RT 1: 6439-10702 bp Neighborhood of RT #1 [6439, 10702] Fil_haemagg_2 Fil_haemagg_2 RVT-UG17 RVT-UG17 COG3415 Feature: gene Location: 6439-6570 bp Feature: gene Location: 6813-8786 bp Feature: domain Description: Fil_haemagg_2 Location: 7068-7509 bp Feature: domain Description: Fil_haemagg_2 Location: 7068-7509 bp Feature: domain Description: Fil_haemagg_2 Location: 7866-8052 bp Feature: domain Description: Fil_haemagg_2 Location: 7866-8052 bp Feature: gene Location: 8936-9637 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 8942-9140 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 8942 -9140 bp Feature: gene Location: 9778-9972 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 9793-9955 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 9793-9955 bp Feature: gene Location: 9978-10541 bp Feature: domain Description: COG3415 Location: 10113-10491 bp Feature: domain Description: COG3415 Location: 10113-10491 bp Feature: gene Location: 10562-10702 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Fil_haemagg_2 (pfam13332), RVT-UG17, COG3415 (Transposase )

Seq: CABVGQ010000402.1 (10045 bp)
Overview 1 RT 1: 8356-9873 bp Neighborhood of RT #1 [8356, 9890] Fil_haemagg_2 RVT-UG17 Feature: gene Location: 8356-8802 bp Feature: domain Description: Fil_haemagg_2 Location: 8368-8602 bp Feature: domain Description: Fil_haemagg_2 Location: 83 68-8602 bp Feature: gene Location: 9228-9572 bp Feature: gene Location: 9717-9890 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 9720-9873 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 9720-9873 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Fil_haemagg_2 (pfam13332), RVT-UG17

Seq: CABVGQ010000466.1 (264994 bp)
Overview 1 RT 1: 262226-264703 bp Neighborhood of RT #1 [262226, 264703] RVT-UG17 Feature: gene Location: 262226-262561 bp Feature: gene Location: 262600-262740 bp Feature: gene Location: 263378-264400 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 263423-263903 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 2634 23-263903 bp Feature: gene Location: 264491-264703 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG17

Seq: CABVGQ010000274.1 (10423 bp)
Overview 1 RT 1: 2-1619 bp Neighborhood of RT #1 [2, 1630] RVT-UG17 SLATT_5 Feature: gene Location: 2-631 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 8-428 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 8-428 bp Feature: gene Location: 836-1036 bp Feature: gene Location: 1346-1630 bp Feature: domain Description: SLATT_5 Location: 1373-1619 bp Feature: domain Description: SLATT_5 Location: 1373-1619 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG17, SLATT_5 (pfam18160)

Seq: CABVGQ010000246.1 (9059 bp)
Overview 1 RT 1: 2842-6876 bp Neighborhood of RT #1 [2842, 6876] Fil_haemagg_2 RVT-UG17 SLATT_5 Feature: gene Location: 2842-3270 bp Feature: domain Description: Fil_haemagg_2 Location: 3049-3217 bp Feature: domain Description: Fil_haemagg_2 Location: 3049-3217 bp Feature: gene Location: 3464-3598 bp Feature: gene Location: 4046-4789 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 4274-4787 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 4274-4787 bp Feature: gene Location: 5065-5385 bp Feature: domain Description: SLATT_5 Location: 5092-5377 bp Feature: domain Description: SLATT_5 Location: 5092-5377 bp Feature: gene Location: 6703-6876 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Fil_haemagg_2 (pfam13332), RVT-UG17, SLATT_5 (pfam18160)

Seq: CABVGQ010000424.1 (11947 bp)
Overview 1 RT 1: 5029-11653 bp Neighborhood of RT #1 [5029, 11653] TIGR02099 TIGR02099 tldD RVT-AbiP2 RVT-AbiP2 Feature: gene Location: 5029-7542 bp Feature: domain Description: TIGR02099 Location: 5728-6454 bp Feature: domain Description: TIGR02099 Location: 57 28-6454 bp Feature: domain Description: TIGR02099 Location: 6592-7537 bp Feature: domain Description: TIGR02099 Location: 6592-7 537 bp Feature: gene Location: 7539-8957 bp Feature: domain Description: tldD Location: 7548-8949 bp Feature: domain Description: tldD Location: 7 548-8949 bp Feature: gene Location: 9127-9660 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 9496-9646 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 9496-9646 bp Feature: gene Location: 9681-10448 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 9684-9945 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 9684-9945 bp Feature: gene Location: 10969-11223 bp Feature: gene Location: 11285-11653 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02099 (TIGR02099 family protein), tldD (PRK10735), RVT-AbiP2

Seq: CABVGQ010000213.1 (20115 bp)
Overview 1 RT 1: 16303-19418 bp Neighborhood of RT #1 [16303, 19444] RVT-UG17 SLATT_5 COG3792 COG3792 Feature: gene Location: 16303-16683 bp Feature: gene Location: 16833-17087 bp Feature: gene Location: 17135-17533 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 17141-17339 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 17141-17339 bp Feature: gene Location: 18137-18754 bp Feature: domain Description: SLATT_5 Location: 18167-18716 bp Feature: domain Description: SLATT_5 Location: 18 167-18 716 bp Feature: gene Location: 19085-19444 bp Feature: domain Description: COG3792 Location: 19133-19232 bp Feature: domain Description: COG3792 Location: 19133-19232 bp Feature: domain Description: COG3792 Location: 19292-19418 bp Feature: domain Description: COG3792 Location: 19292-19418 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG17, SLATT_5 (pfam18160), COG3792 (Uncharacterized protein )