myRT

myRT report for GCA_902497725.1_PS647

Download annotations/find similar RTs

Seq: CABVHL010000004.1 (292933 bp)
Overview 1 RT 1: 151746-155637 bp 2 RT 2: 186006-189436 bp 3 RT 3: 195663-203009 bp 4 RT 4: 234042-238933 bp Neighborhood of RT #1 [151746, 155912] RVT_N RVT-GII GIIM HNH PHA02517 Pat_hypo_Ecoli_Z1214_like Neighborhood of RT #2 [186006, 189507] PinE RVT_N RVT-GII RVT-GII GIIM DDE_Tnp_Tn3 Neighborhood of RT #3 [195663, 203017] cztS_silS_copS OmpR RVT-GII COG3547 RVT-GII GIIM MvaT_DBD Neighborhood of RT #4 [234042, 239052] DDE_Tnp_1 DDE_Tnp_1 RVT-GII GIIM COG4584 IstB_IS21 Feature: gene Location: 151746-151967 bp Feature: gene Location: 152139-152414 bp Feature: gene Location: 152855-154522 bp Feature: domain Description: RVT_N Location: 152900-153143 bp Feature: domain Description: RVT_N Location: 1 52900-1 531 43 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 153188-153833 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 531 88-1 53833 bp Feature: domain Description: GIIM Note: maturase Location: 153884-154118 bp Feature: domain Description: GIIM Note: maturase Location: 1 53884-1 541 1 8 bp Feature: domain Description: HNH Note: nucleases Location: 154370-154505 bp Feature: domain Description: HNH Note: nucleases Location: 1 54370-1 54505 bp Feature: gene Location: 154700-154975 bp Feature: domain Description: PHA02517 Location: 154709-154904 bp Feature: domain Description: PHA0251 7 Location: 1 54709-1 54904 bp Feature: gene Location: 155040-155912 bp Feature: domain Description: Pat_hypo_Ecoli_Z1214_like Location: 155073-155637 bp Feature: domain Description: Pat_hypo_Ecoli_Z1 21 4_like Location: 1 55073-1 55637 bp Feature: gene Location: 186006-186302 bp Feature: domain Description: PinE Location: 186108-186288 bp Feature: domain Description: PinE Location: 1 861 08-1 86288 bp Feature: gene Location: 186572-186748 bp Feature: gene Location: 186842-187585 bp Feature: domain Description: RVT_N Location: 186917-187157 bp Feature: domain Description: RVT_N Location: 1 8691 7-1 871 57 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 187205-187577 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 87205-1 87577 bp Feature: gene Location: 187576-188325 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 187582-187846 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 87582-1 87846 bp Feature: domain Description: GIIM Note: maturase Location: 187897-188131 bp Feature: domain Description: GIIM Note: maturase Location: 1 87897-1 881 31 bp Feature: gene Location: 188491-189507 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 188647-189436 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 1 88647-1 89436 bp Feature: gene Location: 195663-197048 bp Feature: domain Description: cztS_silS_copS Location: 196104-196989 bp Feature: domain Description: cztS_silS_copS Location: 1 961 04-1 96989 bp Feature: gene Location: 197026-197706 bp Feature: domain Description: OmpR Location: 197035-197701 bp Feature: domain Description: OmpR Location: 1 97035-1 97701 bp Feature: gene Location: 197820-198512 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 198024-198480 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 98024-1 98480 bp Feature: gene Location: 199338-199496 bp Feature: gene Location: 199612-200649 bp Feature: domain Description: COG3547 Location: 199627-200593 bp Feature: domain Description: COG3547 Location: 1 99627-200593 bp Feature: gene Location: 200766-202121 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 201057-201672 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 201 057-201 672 bp Feature: domain Description: GIIM Note: maturase Location: 201726-201942 bp Feature: domain Description: GIIM Note: maturase Location: 201 726-201 942 bp Feature: gene Location: 202337-202507 bp Feature: gene Location: 202652-203017 bp Feature: domain Description: MvaT_DBD Location: 202889-203009 bp Feature: domain Description: MvaT_DBD Location: 202889-203009 bp Feature: gene Location: 234042-234266 bp Feature: domain Description: DDE_Tnp_1 Location: 234081-234210 bp Feature: domain Description: DDE_Tnp_1 Location: 234081 -23421 0 bp Feature: gene Location: 234330-235259 bp Feature: domain Description: DDE_Tnp_1 Location: 234753-235035 bp Feature: domain Description: DDE_Tnp_1 Location: 234753-235035 bp Feature: gene Location: 235332-236624 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 235593-236205 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 235593-236205 bp Feature: domain Description: GIIM Note: maturase Location: 236262-236490 bp Feature: domain Description: GIIM Note: maturase Location: 236262-236490 bp Feature: gene Location: 236970-238256 bp Feature: domain Description: COG4584 Location: 236994-237579 bp Feature: domain Description: COG4584 Location: 236994-237579 bp Feature: gene Location: 238249-239052 bp Feature: domain Description: IstB_IS21 Location: 238405-238933 bp Feature: domain Description: IstB_IS21 Location: 238405-238933 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), PHA02517 (putative transposase OrfB; Reviewed), Pat_hypo_Ecoli_Z1214_like (cd07209), PinE (COG1961), DDE_Tnp_Tn3 (pfam01526), cztS_silS_copS (TIGR01386), OmpR (COG0745)
COG3547 (Transposase ), MvaT_DBD (cl40688), DDE_Tnp_1 (pfam01609), COG4584 (Transposase ), IstB_IS21 (pfam01695)

Seq: CABVHL010000024.1 (76928 bp)
Overview 1 RT 1: 28840-36907 bp Neighborhood of RT #1 [28840, 36907] RMtype1_S_TRD-CR_like RMtype1_S_TRD-CR_like HsdM RVT-UG5 nitrilase Feature: gene Location: 28840-30189 bp Feature: domain Description: RMtype1_S_TRD-CR_like Location: 28921-29425 bp Feature: domain Description: RMtype1_S_TRD-CR_like Location: 2 892 1-2 942 5 bp Feature: domain Description: RMtype1_S_TRD-CR_like Location: 29566-30046 bp Feature: domain Description: RMtype1_S_TRD-CR_like Location: 2 9566-30046 bp Feature: gene Location: 30186-32165 bp Feature: domain Description: HsdM Location: 30210-32154 bp Feature: domain Description: HsdM Location: 302 10-32 154 bp Feature: gene Location: 32675-34621 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 33149-33668 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 33149-33668 bp Feature: gene Location: 34627-35550 bp Feature: domain Description: nitrilase Location: 34876-35455 bp Feature: domain Description: nitrilase Location: 34876-35455 bp Feature: gene Location: 35840-36907 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RMtype1_S_TRD-CR_like (cl38903), HsdM (COG0286), RVT-UG5, nitrilase (cl11424)