myRT

myRT report for GCA_902497825.1_PS726

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Seq: CABVHR010000020.1 (127103 bp)
Overview 1 RT 1: 2-3691 bp 2 RT 2: 34728-39619 bp Neighborhood of RT #1 [2, 3699] COG3547 RVT-GII GIIM MvaT_DBD Neighborhood of RT #2 [34728, 39738] DDE_Tnp_1 DDE_Tnp_1 RVT-GII GIIM COG4584 IstB_IS21 Feature: gene Location: 2-178 bp Feature: gene Location: 294-1331 bp Feature: domain Description: COG3547 Location: 309-1275 bp Feature: domain Description: COG3547 Location: 309-1 275 bp Feature: gene Location: 1448-2803 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1739-2354 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 739-2354 bp Feature: domain Description: GIIM Note: maturase Location: 2408-2624 bp Feature: domain Description: GIIM Note: maturase Location: 2408-2624 bp Feature: gene Location: 3019-3189 bp Feature: gene Location: 3334-3699 bp Feature: domain Description: MvaT_DBD Location: 3571-3691 bp Feature: domain Description: MvaT_DBD Location: 3571 -3691 bp Feature: gene Location: 34728-34952 bp Feature: domain Description: DDE_Tnp_1 Location: 34767-34896 bp Feature: domain Description: DDE_Tnp_1 Location: 34767-34896 bp Feature: gene Location: 35016-35945 bp Feature: domain Description: DDE_Tnp_1 Location: 35439-35721 bp Feature: domain Description: DDE_Tnp_1 Location: 35439-35721 bp Feature: gene Location: 36018-37310 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36279-36891 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36279-36891 bp Feature: domain Description: GIIM Note: maturase Location: 36948-37176 bp Feature: domain Description: GIIM Note: maturase Location: 36948-371 76 bp Feature: gene Location: 37656-38942 bp Feature: domain Description: COG4584 Location: 37680-38265 bp Feature: domain Description: COG4584 Location: 37680-38265 bp Feature: gene Location: 38935-39738 bp Feature: domain Description: IstB_IS21 Location: 39091-39619 bp Feature: domain Description: IstB_IS21 Location: 39091 -3961 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CABVHR010000016.1 (159952 bp)
Overview 1 RT 1: 44740-47120 bp Neighborhood of RT #1 [44740, 47194] PBP2_PheC RVT-GII GIIM InsE Feature: gene Location: 44740-45525 bp Feature: domain Description: PBP2_PheC Location: 44818-45505 bp Feature: domain Description: PBP2 _PheC Location: 44818-45505 bp Feature: gene Location: 45631-45828 bp Feature: gene Location: 45835-46410 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45838-46195 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45838-46195 bp Feature: domain Description: GIIM Note: maturase Location: 46252-46408 bp Feature: domain Description: GIIM Note: maturase Location: 462 52 -46408 bp Feature: gene Location: 46410-46724 bp Feature: gene Location: 46892-47194 bp Feature: domain Description: InsE Location: 46898-47120 bp Feature: domain Description: InsE Location: 46898-4712 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CABVHR010000005.1 (366954 bp)
Overview 1 RT 1: 279988-287416 bp 2 RT 2: 291478-297118 bp 3 RT 3: 327473-331639 bp Neighborhood of RT #1 [279988, 287475] RVT-GII GIIM COG3547 RVT-GII OmpR cztS_silS_copS Neighborhood of RT #2 [291478, 297132] DDE_Tnp_Tn3 RVT-GII GIIM RVT_N RVT-GII PinE Neighborhood of RT #3 [327473, 331639] Pat_hypo_Ecoli_Z1214_like PHA02517 RVT_N RVT-GII GIIM HNH Feature: gene Location: 279988-280581 bp Feature: gene Location: 280632-280850 bp Feature: gene Location: 280951-282372 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 281308-281923 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2813 08-281923 bp Feature: domain Description: GIIM Note: maturase Location: 281980-282205 bp Feature: domain Description: GIIM Note: maturase Location: 281980-282205 bp Feature: gene Location: 282489-283526 bp Feature: domain Description: COG3547 Location: 282504-283470 bp Feature: domain Description: COG3 547 Location: 282504-283 470 bp Feature: gene Location: 283642-283800 bp Feature: gene Location: 284626-285318 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 284830-285292 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28483 0-285292 bp Feature: gene Location: 285432-286112 bp Feature: domain Description: OmpR Location: 285441-286107 bp Feature: domain Description: OmpR Location: 285441-286107 bp Feature: gene Location: 286090-287475 bp Feature: domain Description: cztS_silS_copS Location: 286531-287416 bp Feature: domain Description: cztS_silS_copS Location: 28653 1-287416 bp Feature: gene Location: 291478-291693 bp Feature: gene Location: 293631-294647 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 293787-294576 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 293 787-294576 bp Feature: gene Location: 294813-295562 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 294819-295083 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 294819-295083 bp Feature: domain Description: GIIM Note: maturase Location: 295134-295368 bp Feature: domain Description: GIIM Note: maturase Location: 29513 4-2953 68 bp Feature: gene Location: 295553-296296 bp Feature: domain Description: RVT_N Location: 295628-295868 bp Feature: domain Description: RVT_N Location: 295628-295868 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 295916-296288 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 295916-296288 bp Feature: gene Location: 296342-296524 bp Feature: gene Location: 296836-297132 bp Feature: domain Description: PinE Location: 296938-297118 bp Feature: domain Description: PinE Location: 29693 8-297118 bp Feature: gene Location: 327473-328345 bp Feature: domain Description: Pat_hypo_Ecoli_Z1214_like Location: 327506-328070 bp Feature: domain Description: Pat_hypo_Ecoli_Z1214_like Location: 3 27506-3 28070 bp Feature: gene Location: 328410-328685 bp Feature: domain Description: PHA02517 Location: 328419-328614 bp Feature: domain Description: PHA02517 Location: 3 28419-3 28614 bp Feature: gene Location: 328863-330530 bp Feature: domain Description: RVT_N Location: 328908-329151 bp Feature: domain Description: RVT_N Location: 3 28908-3 29151 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 329196-329841 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 29196-3 29841 bp Feature: domain Description: GIIM Note: maturase Location: 329892-330126 bp Feature: domain Description: GIIM Note: maturase Location: 3 29892-3 3 0126 bp Feature: domain Description: HNH Note: nucleases Location: 330378-330513 bp Feature: domain Description: HNH Note: nucleases Location: 3 3 03 78-3 3 0513 bp Feature: gene Location: 330971-331246 bp Feature: gene Location: 331418-331639 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT