myRT

myRT report for GCA_902502325.1_IBESS1154

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Seq: CABVXI010000120.1 (1396 bp)
Overview 1 RT 1: 145-1102 bp Neighborhood of RT #1 [145, 1272] RVT-GII Feature: gene Location: 145-1272 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 445-1102 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 445-1 1 02 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: CABVXI010000094.1 (2689 bp)
Overview 1 RT 1: 305-2346 bp Neighborhood of RT #1 [305, 2495] DDE_Tnp_1 RVT-GII RVT-GII HTH_23 InsE Feature: gene Location: 305-1087 bp Feature: domain Description: DDE_Tnp_1 Location: 311-1019 bp Feature: domain Description: DDE_Tnp_1 Location: 311-1019 bp Feature: gene Location: 1113-1316 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1221-1311 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 2 1-1311 bp Feature: gene Location: 1377-1733 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1386-1707 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1386-1707 bp Feature: gene Location: 1827-2495 bp Feature: domain Description: HTH_23 Location: 1935-2022 bp Feature: domain Description: HTH_2 3 Location: 1935-2 02 2 bp Feature: domain Description: InsE Location: 2151-2346 bp Feature: domain Description: InsE Location: 2 151-2 346 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT-GII, HTH_23 (pfam13384), InsE (COG2963)

Seq: CABVXI010000073.1 (6239 bp)
Overview 1 RT 1: 1796-4768 bp Neighborhood of RT #1 [1796, 4768] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 1796-2062 bp Feature: gene Location: 2298-2432 bp Feature: gene Location: 2589-4262 bp Feature: domain Description: RVT_N Location: 2637-2880 bp Feature: domain Description: RVT_N Location: 263 7-2880 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2925-3570 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2925-3 570 bp Feature: domain Description: GIIM Note: maturase Location: 3624-3855 bp Feature: domain Description: GIIM Note: maturase Location: 3 624-3 855 bp Feature: domain Description: HNHc Note: nucleases Location: 4056-4215 bp Feature: domain Description: HNHc Note: nucleases Location: 4056-4215 bp Feature: gene Location: 4295-4516 bp Feature: gene Location: 4574-4768 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: CABVXI010000096.1 (2537 bp)
Overview 1 RT 1: 231-2534 bp Neighborhood of RT #1 [231, 2534] RVT-GII GIIM Feature: gene Location: 231-1754 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 504-1236 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 504 -1236 bp Feature: domain Description: GIIM Note: maturase Location: 1311-1509 bp Feature: domain Description: GIIM Note: maturase Location: 1311-1509 bp Feature: gene Location: 2385-2534 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: CABVXI010000085.1 (3682 bp)
Overview 1 RT 1: 2186-3533 bp Neighborhood of RT #1 [2186, 3533] RVT-GII GIIM Feature: gene Location: 2186-2371 bp Feature: gene Location: 2543-2698 bp Feature: gene Location: 2724-3251 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2730-2874 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2730-2874 bp Feature: domain Description: GIIM Note: maturase Location: 2958-3174 bp Feature: domain Description: GIIM Note: maturase Location: 295 8-3174 bp Feature: gene Location: 3261-3533 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: CABVXI010000051.1 (15452 bp)
Overview 1 RT 1: 3-2592 bp Neighborhood of RT #1 [3, 2606] DDE_Tnp_IS66 RVT-GII GIIM DDE_Tnp_IS66_C COG3547 Feature: gene Location: 3-137 bp Feature: domain Description: DDE_Tnp_IS66 Location: 15-111 bp Feature: domain Description: DDE_Tnp_IS6 6 Location: 15-111 bp Feature: gene Location: 615-1832 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 801-1455 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 801-1455 bp Feature: domain Description: GIIM Note: maturase Location: 1533-1755 bp Feature: domain Description: GIIM Note: maturase Location: 1533-1755 bp Feature: gene Location: 1948-2094 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1960-2071 bp Feature: domain Description: DDE_Tnp_IS6 6 _C Location: 196 0-2071 bp Feature: gene Location: 2121-2606 bp Feature: domain Description: COG3547 Location: 2139-2592 bp Feature: domain Description: COG3547 Location: 2139-2592 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66 (pfam03050), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66_C (pfam13817), COG3547 (Transposase )