myRT

myRT report for GCA_902502385.1_IBESS539

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Seq: CABVXT010000102.1 (7149 bp)
Overview 1 RT 1: 101-1330 bp Neighborhood of RT #1 [101, 1404] RVT-GII RVT-GII group_II_RT_mat IS285 Feature: gene Location: 101-304 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 146-302 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 46-302 bp Feature: gene Location: 338-574 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 341-521 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 341 -521 bp Feature: gene Location: 567-779 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 570-768 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 570-768 bp Feature: gene Location: 922-1404 bp Feature: domain Description: IS285 Location: 952-1330 bp Feature: domain Description: IS285 Location: 952-1 330 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, group_II_RT_mat (TIGR04416), IS285 (COG3328)

Seq: CABVXT010000103.1 (7116 bp)
Overview 1 RT 1: 4511-7088 bp Neighborhood of RT #1 [4511, 7114] COG3547 RVT-GII GIIM DDE_Tnp_IS66 Feature: gene Location: 4511-4996 bp Feature: domain Description: COG3547 Location: 4529-4982 bp Feature: domain Description: COG3547 Location: 452 9-4982 bp Feature: gene Location: 5092-5259 bp Feature: gene Location: 5285-6502 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5471-6125 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5471-612 5 bp Feature: domain Description: GIIM Note: maturase Location: 6203-6425 bp Feature: domain Description: GIIM Note: maturase Location: 62 03-642 5 bp Feature: gene Location: 6513-6932 bp Feature: gene Location: 6980-7114 bp Feature: domain Description: DDE_Tnp_IS66 Location: 6992-7088 bp Feature: domain Description: DDE_Tnp_IS66 Location: 6992 -7088 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66 (pfam03050)

Seq: CABVXT010000154.1 (2537 bp)
Overview 1 RT 1: 231-2534 bp Neighborhood of RT #1 [231, 2534] RVT-GII GIIM Feature: gene Location: 231-1754 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 504-1236 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 504-123 6 bp Feature: domain Description: GIIM Note: maturase Location: 1311-1509 bp Feature: domain Description: GIIM Note: maturase Location: 13 11-1509 bp Feature: gene Location: 2385-2534 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: CABVXT010000133.1 (3681 bp)
Overview 1 RT 1: 2186-3533 bp Neighborhood of RT #1 [2186, 3533] RVT-GII GIIM Feature: gene Location: 2186-2371 bp Feature: gene Location: 2543-2698 bp Feature: gene Location: 2724-3251 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2730-2874 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2730-2874 bp Feature: domain Description: GIIM Note: maturase Location: 2958-3174 bp Feature: domain Description: GIIM Note: maturase Location: 2958-3174 bp Feature: gene Location: 3261-3533 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: CABVXT010000209.1 (1396 bp)
Overview 1 RT 1: 125-1082 bp Neighborhood of RT #1 [125, 1252] RVT-GII Feature: gene Location: 125-1252 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 425-1082 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 425 -1082 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: CABVXT010000115.1 (6238 bp)
Overview 1 RT 1: 1795-4767 bp Neighborhood of RT #1 [1795, 4767] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 1795-2061 bp Feature: gene Location: 2297-2431 bp Feature: gene Location: 2588-4261 bp Feature: domain Description: RVT_N Location: 2636-2879 bp Feature: domain Description: RVT_N Location: 26 36 -2879 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2924-3569 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2924-356 9 bp Feature: domain Description: GIIM Note: maturase Location: 3623-3854 bp Feature: domain Description: GIIM Note: maturase Location: 36 23-3854 bp Feature: domain Description: HNHc Note: nucleases Location: 4055-4214 bp Feature: domain Description: HNHc Note: nucleases Location: 4055-4214 bp Feature: gene Location: 4294-4515 bp Feature: gene Location: 4573-4767 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: CABVXT010000149.1 (2689 bp)
Overview 1 RT 1: 305-2346 bp Neighborhood of RT #1 [305, 2495] DDE_Tnp_1 RVT-GII RVT-GII HTH_23 InsE Feature: gene Location: 305-1087 bp Feature: domain Description: DDE_Tnp_1 Location: 311-1019 bp Feature: domain Description: DDE_Tnp_1 Location: 311-1019 bp Feature: gene Location: 1113-1316 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1221-1311 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1221-1311 bp Feature: gene Location: 1377-1733 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1386-1707 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1386-17 07 bp Feature: gene Location: 1827-2495 bp Feature: domain Description: HTH_23 Location: 1935-2022 bp Feature: domain Description: HTH_23 Location: 1935-2022 bp Feature: domain Description: InsE Location: 2151-2346 bp Feature: domain Description: InsE Location: 2151-2346 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT-GII, HTH_23 (pfam13384), InsE (COG2963)