myRT

myRT report for GCA_902503255.1_IBESS45

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Seq: CABWAS010000223.1 (2682 bp)
Overview 1 RT 1: 133-2416 bp Neighborhood of RT #1 [133, 2416] RVT_N RVT-GII YkfC HNHc Feature: gene Location: 133-1857 bp Feature: domain Description: RVT_N Location: 190-427 bp Feature: domain Description: RVT_N Location: 1 90-427 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 478-1126 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 478-1 1 26 bp Feature: domain Description: YkfC Location: 1258-1414 bp Feature: domain Description: YkfC Location: 1 258-1 41 4 bp Feature: domain Description: HNHc Note: nucleases Location: 1642-1801 bp Feature: domain Description: HNHc Note: nucleases Location: 1 642-1 801 bp Feature: gene Location: 1898-2038 bp Feature: gene Location: 2120-2416 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNHc (smart00507)

Seq: CABWAS010000160.1 (6627 bp)
Overview 1 RT 1: 4072-6493 bp Neighborhood of RT #1 [4072, 6493] COG3547 RVT-GII GIIM Feature: gene Location: 4072-4557 bp Feature: domain Description: COG3547 Location: 4090-4543 bp Feature: domain Description: COG3547 Location: 4090-4543 bp Feature: gene Location: 4653-4820 bp Feature: gene Location: 4846-6063 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5032-5686 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5032 -5686 bp Feature: domain Description: GIIM Note: maturase Location: 5764-5986 bp Feature: domain Description: GIIM Note: maturase Location: 5764-5986 bp Feature: gene Location: 6074-6493 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), RVT-GII, GIIM (pfam08388)

Seq: CABWAS010000180.1 (5382 bp)
Overview 1 RT 1: 3915-5308 bp Neighborhood of RT #1 [3915, 5322] RVT_N RVT-GII Feature: gene Location: 3915-4181 bp Feature: gene Location: 4417-4551 bp Feature: gene Location: 4708-5322 bp Feature: domain Description: RVT_N Location: 4756-4999 bp Feature: domain Description: RVT_N Location: 4756-4999 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5044-5308 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5044-53 08 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: CABWAS010000159.1 (6718 bp)
Overview 1 RT 1: 112-6302 bp Neighborhood of RT #1 [112, 6304] RVT-GII GIIM PHA02517 ESPR Peptidase_S6 autotrans_barl Feature: gene Location: 112-1458 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 208-940 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 208-94 0 bp Feature: domain Description: GIIM Note: maturase Location: 1015-1213 bp Feature: domain Description: GIIM Note: maturase Location: 1015-1213 bp Feature: gene Location: 1635-2021 bp Feature: domain Description: PHA02517 Location: 1638-2019 bp Feature: domain Description: PHA02517 Location: 1638-2019 bp Feature: gene Location: 2186-6304 bp Feature: domain Description: ESPR Location: 2189-2258 bp Feature: domain Description: ESPR Location: 2189-2258 bp Feature: domain Description: Peptidase_S6 Location: 2339-4511 bp Feature: domain Description: Peptidase_S6 Location: 2339-4 511 bp Feature: domain Description: autotrans_barl Location: 5075-6302 bp Feature: domain Description: autotrans_barl Location: 5075-6302 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), ESPR (pfam13018), Peptidase_S6 (pfam02395), autotrans_barl (TIGR01414)

Seq: CABWAS010000158.1 (6754 bp)
Overview 1 RT 1: 2455-6341 bp Neighborhood of RT #1 [2455, 6361] RVT-GII GIIM RVT-GII Tra5 PAP2_acid_phosphatase Feature: gene Location: 2455-2697 bp Feature: gene Location: 2869-3024 bp Feature: gene Location: 3050-3577 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3056-3200 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 305 6-3200 bp Feature: domain Description: GIIM Note: maturase Location: 3284-3500 bp Feature: domain Description: GIIM Note: maturase Location: 3284-35 00 bp Feature: gene Location: 3587-3859 bp Feature: gene Location: 3876-5003 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4176-4833 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4176-4833 bp Feature: gene Location: 5016-5237 bp Feature: domain Description: Tra5 Location: 5028-5220 bp Feature: domain Description: Tra5 Location: 5 028-5 220 bp Feature: gene Location: 5612-6361 bp Feature: domain Description: PAP2_acid_phosphatase Location: 5687-6341 bp Feature: domain Description: PAP2_acid_phosphatase Location: 5 687-6341 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Tra5 (COG2801), PAP2_acid_phosphatase (cd03397)

Seq: CABWAS010000252.1 (1678 bp)
Overview 1 RT 1: 164-1385 bp Neighborhood of RT #1 [164, 1534] RVT-GII RVT-GII HTH_23 InsE Feature: gene Location: 164-367 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 272-362 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 272-36 2 bp Feature: gene Location: 428-784 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 437-758 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 437-758 bp Feature: gene Location: 878-1534 bp Feature: domain Description: HTH_23 Location: 986-1073 bp Feature: domain Description: HTH_23 Location: 986 -1073 bp Feature: domain Description: InsE Location: 1202-1385 bp Feature: domain Description: InsE Location: 1202-1385 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HTH_23 (pfam13384), InsE (COG2963)