myRT

myRT report for GCA_902503525.1_IBESS453

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Seq: CABWCA010000193.1 (5895 bp)
Overview 1 RT 1: 87-4940 bp Neighborhood of RT #1 [87, 4942] Tra5 RVT-GII RVT-GII GIIM ushA Feature: gene Location: 87-254 bp Feature: gene Location: 629-850 bp Feature: domain Description: Tra5 Location: 641-833 bp Feature: domain Description: Tra5 Location: 641 -833 bp Feature: gene Location: 863-1990 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1163-1820 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 63-1 820 bp Feature: gene Location: 2289-2816 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2295-2439 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2295-2439 bp Feature: domain Description: GIIM Note: maturase Location: 2523-2739 bp Feature: domain Description: GIIM Note: maturase Location: 2523-2739 bp Feature: gene Location: 3169-3411 bp Feature: gene Location: 3323-4942 bp Feature: domain Description: ushA Location: 3338-4940 bp Feature: domain Description: ushA Location: 3338-4940 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra5 (COG2801), RVT-GII, GIIM (pfam08388), ushA (PRK09558)

Seq: CABWCA010000304.1 (1267 bp)
Overview 1 RT 1: 684-1137 bp Neighborhood of RT #1 [684, 1265] RVT-GII Feature: gene Location: 684-1265 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 786-1137 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 786-1137 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: CABWCA010000207.1 (4796 bp)
Overview 1 RT 1: 1-1560 bp Neighborhood of RT #1 [1, 1574] RVT-GII GIIM DDE_Tnp_IS66_C COG3547 Feature: gene Location: 1-258 bp Feature: gene Location: 273-800 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 279-423 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 279-423 bp Feature: domain Description: GIIM Note: maturase Location: 501-723 bp Feature: domain Description: GIIM Note: maturase Location: 501-723 bp Feature: gene Location: 916-1062 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 928-1039 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 928-103 9 bp Feature: gene Location: 1089-1574 bp Feature: domain Description: COG3547 Location: 1107-1560 bp Feature: domain Description: COG3 547 Location: 1107-1560 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66_C (pfam13817), COG3547 (Transposase )

Seq: CABWCA010000309.1 (1191 bp)
Overview 1 RT 1: 3-1000 bp Neighborhood of RT #1 [3, 1026] DDE_Tnp_1 RVT-GII RVT-GII Feature: gene Location: 3-380 bp Feature: domain Description: DDE_Tnp_1 Location: 9-255 bp Feature: domain Description: DDE_Tnp_1 Location: 9-255 bp Feature: gene Location: 406-609 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 514-604 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 514 -604 bp Feature: gene Location: 670-1026 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 679-1000 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 679-1000 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT-GII