myRT

myRT report for GCA_902503925.1_IBESS394

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Seq: CABWDK010000198.1 (6296 bp)
Overview 1 RT 1: 3691-6268 bp Neighborhood of RT #1 [3691, 6294] COG3547 RVT-GII GIIM DDE_Tnp_IS66 Feature: gene Location: 3691-4176 bp Feature: domain Description: COG3547 Location: 3709-4162 bp Feature: domain Description: COG3547 Location: 3709-41 62 bp Feature: gene Location: 4272-4439 bp Feature: gene Location: 4465-5682 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4651-5305 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4651 -5305 bp Feature: domain Description: GIIM Note: maturase Location: 5383-5605 bp Feature: domain Description: GIIM Note: maturase Location: 5383-5605 bp Feature: gene Location: 5693-6112 bp Feature: gene Location: 6160-6294 bp Feature: domain Description: DDE_Tnp_IS66 Location: 6172-6268 bp Feature: domain Description: DDE_Tnp_IS66 Location: 61 72-6268 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66 (pfam03050)

Seq: CABWDK010000189.1 (7139 bp)
Overview 1 RT 1: 444-5879 bp Neighborhood of RT #1 [444, 5881] PAP2_acid_phosphatase Tra5 RVT-GII RVT-GII GIIM ushA Feature: gene Location: 444-1193 bp Feature: domain Description: PAP2_acid_phosphatase Location: 519-1173 bp Feature: domain Description: PAP2 _acid_phosphatase Location: 519-1173 bp Feature: gene Location: 1568-1789 bp Feature: domain Description: Tra5 Location: 1580-1772 bp Feature: domain Description: Tra5 Location: 1580-1772 bp Feature: gene Location: 1802-2929 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2102-2759 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 102 -2 759 bp Feature: gene Location: 3228-3755 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3234-3378 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32 34-3378 bp Feature: domain Description: GIIM Note: maturase Location: 3462-3678 bp Feature: domain Description: GIIM Note: maturase Location: 3462 -3678 bp Feature: gene Location: 4108-4350 bp Feature: gene Location: 4262-5881 bp Feature: domain Description: ushA Location: 4277-5879 bp Feature: domain Description: ushA Location: 42 77-5879 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PAP2_acid_phosphatase (cd03397), Tra5 (COG2801), RVT-GII, GIIM (pfam08388), ushA (PRK09558)

Seq: CABWDK010000212.1 (5277 bp)
Overview 1 RT 1: 2313-4929 bp Neighborhood of RT #1 [2313, 5078] DDE_Tnp_1 RVT-GII RVT-GII HTH_23 InsE Feature: gene Location: 2313-2612 bp Feature: gene Location: 2888-3670 bp Feature: domain Description: DDE_Tnp_1 Location: 2894-3602 bp Feature: domain Description: DDE_Tnp_1 Location: 2894-3 602 bp Feature: gene Location: 3696-3899 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3804-3894 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 804-3 894 bp Feature: gene Location: 3960-4316 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3969-4290 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 969-4290 bp Feature: gene Location: 4410-5078 bp Feature: domain Description: HTH_23 Location: 4518-4605 bp Feature: domain Description: HTH_23 Location: 4518-4605 bp Feature: domain Description: InsE Location: 4743-4929 bp Feature: domain Description: InsE Location: 4743 -4929 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT-GII, HTH_23 (pfam13384), InsE (COG2963)

Seq: CABWDK010000195.1 (6601 bp)
Overview 1 RT 1: 4742-6477 bp Neighborhood of RT #1 [4742, 6494] RVT_N RVT-GII Feature: gene Location: 4742-5008 bp Feature: gene Location: 5244-5378 bp Feature: gene Location: 5535-6494 bp Feature: domain Description: RVT_N Location: 5583-5826 bp Feature: domain Description: RVT_N Location: 5583-5826 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5871-6477 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5871-64 77 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII