myRT

myRT report for GCA_902504275.1_IBESS857

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Seq: CABWEQ010000084.1 (4821 bp)
Overview 1 RT 1: 2129-4507 bp Neighborhood of RT #1 [2129, 4677] RVT-GII GIIM RVT-GII Feature: gene Location: 2129-2371 bp Feature: gene Location: 2543-2698 bp Feature: gene Location: 2724-3251 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2730-2874 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2730-2874 bp Feature: domain Description: GIIM Note: maturase Location: 2958-3174 bp Feature: domain Description: GIIM Note: maturase Location: 2958-31 74 bp Feature: gene Location: 3261-3533 bp Feature: gene Location: 3550-4677 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3850-4507 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3850-4507 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: CABWEQ010000095.1 (2691 bp)
Overview 1 RT 1: 307-2348 bp Neighborhood of RT #1 [307, 2497] DDE_Tnp_1 RVT-GII RVT-GII HTH_23 InsE Feature: gene Location: 307-1089 bp Feature: domain Description: DDE_Tnp_1 Location: 313-1021 bp Feature: domain Description: DDE_Tnp_1 Location: 313-102 1 bp Feature: gene Location: 1115-1318 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1223-1313 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 2 3-1313 bp Feature: gene Location: 1379-1735 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1388-1709 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1388-1709 bp Feature: gene Location: 1829-2497 bp Feature: domain Description: HTH_23 Location: 1937-2024 bp Feature: domain Description: HTH_2 3 Location: 1937-2 02 4 bp Feature: domain Description: InsE Location: 2153-2348 bp Feature: domain Description: InsE Location: 2 153-2 348 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT-GII, HTH_23 (pfam13384), InsE (COG2963)

Seq: CABWEQ010000011.1 (136801 bp)
Overview 1 RT 1: 16970-20681 bp Neighborhood of RT #1 [16970, 20944] Resolvase RVT-Retrons HTH_XRE Feature: gene Location: 16970-17641 bp Feature: domain Description: Resolvase Location: 16991-17408 bp Feature: domain Description: Resolvase Location: 16991-17408 bp Feature: gene Location: 17656-17865 bp Feature: gene Location: 17902-19608 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 18052-18649 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 18052-18649 bp Feature: gene Location: 19743-20240 bp Feature: gene Location: 20480-20944 bp Feature: domain Description: HTH_XRE Location: 20510-20681 bp Feature: domain Description: HTH_XRE Location: 20510-20681 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Resolvase (smart00857), RVT-Retrons, HTH_XRE (smart00530)

Seq: CABWEQ010000079.1 (6239 bp)
Overview 1 RT 1: 1472-4200 bp Neighborhood of RT #1 [1472, 4200] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 1472-1666 bp Feature: gene Location: 1724-1945 bp Feature: gene Location: 1978-3651 bp Feature: domain Description: RVT_N Location: 2026-2269 bp Feature: domain Description: RVT_N Location: 2026-2269 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2314-2959 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2314 -2959 bp Feature: domain Description: GIIM Note: maturase Location: 3013-3244 bp Feature: domain Description: GIIM Note: maturase Location: 3013-324 4 bp Feature: domain Description: HNHc Note: nucleases Location: 3445-3604 bp Feature: domain Description: HNHc Note: nucleases Location: 34 4 5-3604 bp Feature: gene Location: 3808-3942 bp Feature: gene Location: 4006-4200 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: CABWEQ010000038.1 (41328 bp)
Overview 1 RT 1: 37640-41300 bp Neighborhood of RT #1 [37640, 41326] sopB_N HTH_24 ParB COG3547 RVT-GII GIIM DDE_Tnp_IS66 Feature: gene Location: 37640-38467 bp Feature: domain Description: sopB_N Location: 37664-37859 bp Feature: domain Description: sopB_N Location: 37664-3785 9 bp Feature: domain Description: HTH_24 Location: 37961-38036 bp Feature: domain Description: HTH_24 Location: 37961-38036 bp Feature: domain Description: ParB Location: 38072-38447 bp Feature: domain Description: ParB Location: 38072-38447 bp Feature: gene Location: 38723-39208 bp Feature: domain Description: COG3547 Location: 38741-39194 bp Feature: domain Description: COG35 47 Location: 38741-39194 bp Feature: gene Location: 39497-40714 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39683-40337 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39683-40337 bp Feature: domain Description: GIIM Note: maturase Location: 40415-40637 bp Feature: domain Description: GIIM Note: maturase Location: 40415 -40637 bp Feature: gene Location: 41192-41326 bp Feature: domain Description: DDE_Tnp_IS66 Location: 41204-41300 bp Feature: domain Description: DDE_Tnp_IS66 Location: 41204-41300 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT sopB_N (cd16394), HTH_24 (pfam13412), ParB (smart00470), COG3547 (Transposase ), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66 (pfam03050)