myRT

myRT report for GCA_902504545.1_IBESS653

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Seq: CABWFU010000193.1 (3778 bp)
Overview 1 RT 1: 2-1547 bp Neighborhood of RT #1 [2, 1547] RVT-GII GIIM HNHc Feature: gene Location: 2-184 bp Feature: gene Location: 280-1041 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 289-349 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 289-349 bp Feature: domain Description: GIIM Note: maturase Location: 403-634 bp Feature: domain Description: GIIM Note: maturase Location: 403-634 bp Feature: domain Description: HNHc Note: nucleases Location: 835-994 bp Feature: domain Description: HNHc Note: nucleases Location: 835-994 bp Feature: gene Location: 1074-1295 bp Feature: gene Location: 1353-1547 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: CABWFU010000201.1 (3237 bp)
Overview 1 RT 1: 213-2894 bp Neighborhood of RT #1 [213, 3043] DDE_Tnp_1 DDE_Tnp_1 RVT-GII RVT-GII HTH_23 InsE Feature: gene Location: 213-650 bp Feature: domain Description: DDE_Tnp_1 Location: 255-366 bp Feature: domain Description: DDE_Tnp_1 Location: 2 55-366 bp Feature: gene Location: 853-1635 bp Feature: domain Description: DDE_Tnp_1 Location: 859-1567 bp Feature: domain Description: DDE_Tnp_1 Location: 859-1567 bp Feature: gene Location: 1661-1864 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1769-1859 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1769-1859 bp Feature: gene Location: 1925-2281 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1934-2255 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1934-2 2 55 bp Feature: gene Location: 2375-3043 bp Feature: domain Description: HTH_23 Location: 2483-2570 bp Feature: domain Description: HTH_2 3 Location: 2 483-2 570 bp Feature: domain Description: InsE Location: 2699-2894 bp Feature: domain Description: InsE Location: 2 699-2 894 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT-GII, HTH_23 (pfam13384), InsE (COG2963)

Seq: CABWFU010000154.1 (6727 bp)
Overview 1 RT 1: 4122-6699 bp Neighborhood of RT #1 [4122, 6725] COG3547 RVT-GII GIIM DDE_Tnp_IS66 Feature: gene Location: 4122-4607 bp Feature: domain Description: COG3547 Location: 4140-4593 bp Feature: domain Description: COG3 547 Location: 4140-4593 bp Feature: gene Location: 4703-4870 bp Feature: gene Location: 4896-6113 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5082-5736 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5082-573 6 bp Feature: domain Description: GIIM Note: maturase Location: 5814-6036 bp Feature: domain Description: GIIM Note: maturase Location: 5814-603 6 bp Feature: gene Location: 6124-6543 bp Feature: gene Location: 6591-6725 bp Feature: domain Description: DDE_Tnp_IS66 Location: 6603-6699 bp Feature: domain Description: DDE_Tnp_IS66 Location: 6603 -6699 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66 (pfam03050)

Seq: CABWFU010000176.1 (5287 bp)
Overview 1 RT 1: 377-4688 bp Neighborhood of RT #1 [377, 4690] Tra5 RVT-GII RVT-GII GIIM ushA Feature: gene Location: 377-598 bp Feature: domain Description: Tra5 Location: 389-581 bp Feature: domain Description: Tra5 Location: 389-581 bp Feature: gene Location: 611-1738 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1568 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1568 bp Feature: gene Location: 2037-2564 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2043-2187 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 204 3-2187 bp Feature: domain Description: GIIM Note: maturase Location: 2271-2487 bp Feature: domain Description: GIIM Note: maturase Location: 2271-24 87 bp Feature: gene Location: 2917-3159 bp Feature: gene Location: 3071-4690 bp Feature: domain Description: ushA Location: 3086-4688 bp Feature: domain Description: ushA Location: 3086-4 688 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra5 (COG2801), RVT-GII, GIIM (pfam08388), ushA (PRK09558)