myRT

myRT report for GCA_902504595.1_IBESS904

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Seq: CABWGD010000194.1 (5177 bp)
Overview 1 RT 1: 380-4691 bp Neighborhood of RT #1 [380, 4693] Tra5 RVT-GII RVT-GII GIIM ushA Feature: gene Location: 380-601 bp Feature: domain Description: Tra5 Location: 392-584 bp Feature: domain Description: Tra5 Location: 392-584 bp Feature: gene Location: 614-1741 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 914-1571 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91 4-1 571 bp Feature: gene Location: 2040-2567 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2046-2190 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2046-21 90 bp Feature: domain Description: GIIM Note: maturase Location: 2274-2490 bp Feature: domain Description: GIIM Note: maturase Location: 2274-2490 bp Feature: gene Location: 2920-3162 bp Feature: gene Location: 3074-4693 bp Feature: domain Description: ushA Location: 3089-4691 bp Feature: domain Description: ushA Location: 3089-4691 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra5 (COG2801), RVT-GII, GIIM (pfam08388), ushA (PRK09558)

Seq: CABWGD010000229.1 (2573 bp)
Overview 1 RT 1: 189-2230 bp Neighborhood of RT #1 [189, 2379] DDE_Tnp_1 RVT-GII RVT-GII HTH_23 InsE Feature: gene Location: 189-971 bp Feature: domain Description: DDE_Tnp_1 Location: 195-903 bp Feature: domain Description: DDE_Tnp_1 Location: 195-903 bp Feature: gene Location: 997-1200 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1105-1195 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1105-1195 bp Feature: gene Location: 1261-1617 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1270-1591 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 70-1591 bp Feature: gene Location: 1711-2379 bp Feature: domain Description: HTH_23 Location: 1819-1906 bp Feature: domain Description: HTH_2 3 Location: 1819-1906 bp Feature: domain Description: InsE Location: 2035-2230 bp Feature: domain Description: InsE Location: 2 035-2 2 30 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT-GII, HTH_23 (pfam13384), InsE (COG2963)

Seq: CABWGD010000177.1 (6425 bp)
Overview 1 RT 1: 3820-6397 bp Neighborhood of RT #1 [3820, 6423] COG3547 RVT-GII GIIM DDE_Tnp_IS66 Feature: gene Location: 3820-4305 bp Feature: domain Description: COG3547 Location: 3838-4291 bp Feature: domain Description: COG3 547 Location: 3 83 8-4291 bp Feature: gene Location: 4401-4568 bp Feature: gene Location: 4594-5811 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4780-5434 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4780-543 4 bp Feature: domain Description: GIIM Note: maturase Location: 5512-5734 bp Feature: domain Description: GIIM Note: maturase Location: 5512-573 4 bp Feature: gene Location: 5822-6241 bp Feature: gene Location: 6289-6423 bp Feature: domain Description: DDE_Tnp_IS66 Location: 6301-6397 bp Feature: domain Description: DDE_Tnp_IS66 Location: 63 01-63 97 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66 (pfam03050)