myRT

myRT report for GCA_902504935.1_IBESS664

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Seq: CABWHG010000201.1 (5540 bp)
Overview 1 RT 1: 88-4941 bp Neighborhood of RT #1 [88, 4943] Tra5 RVT-GII RVT-GII GIIM ushA Feature: gene Location: 88-255 bp Feature: gene Location: 630-851 bp Feature: domain Description: Tra5 Location: 642-834 bp Feature: domain Description: Tra5 Location: 642-834 bp Feature: gene Location: 864-1991 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1164-1821 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 64-1 821 bp Feature: gene Location: 2290-2817 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2296-2440 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2296-2440 bp Feature: domain Description: GIIM Note: maturase Location: 2524-2740 bp Feature: domain Description: GIIM Note: maturase Location: 2524-2740 bp Feature: gene Location: 3170-3412 bp Feature: gene Location: 3324-4943 bp Feature: domain Description: ushA Location: 3339-4941 bp Feature: domain Description: ushA Location: 3339-4941 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra5 (COG2801), RVT-GII, GIIM (pfam08388), ushA (PRK09558)

Seq: CABWHG010000306.1 (1079 bp)
Overview 1 RT 1: 2-888 bp Neighborhood of RT #1 [2, 914] DDE_Tnp_1 RVT-GII RVT-GII Feature: gene Location: 2-268 bp Feature: domain Description: DDE_Tnp_1 Location: 8-254 bp Feature: domain Description: DDE_Tnp_1 Location: 8-2 54 bp Feature: gene Location: 294-497 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 402-492 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 402 -492 bp Feature: gene Location: 558-914 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 567-888 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 567-888 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT-GII

Seq: CABWHG010000211.1 (4800 bp)
Overview 1 RT 1: 3223-4799 bp Neighborhood of RT #1 [3223, 4799] COG3547 RVT-GII GIIM Feature: gene Location: 3223-3708 bp Feature: domain Description: COG3547 Location: 3241-3694 bp Feature: domain Description: COG3 547 Location: 3 241-3 694 bp Feature: gene Location: 3804-3971 bp Feature: gene Location: 3997-4524 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4003-4147 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4003 -4147 bp Feature: domain Description: GIIM Note: maturase Location: 4225-4447 bp Feature: domain Description: GIIM Note: maturase Location: 4225-4447 bp Feature: gene Location: 4539-4799 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), RVT-GII, GIIM (pfam08388)

Seq: CABWHG010000297.1 (1268 bp)
Overview 1 RT 1: 685-1138 bp Neighborhood of RT #1 [685, 1266] RVT-GII Feature: gene Location: 685-1266 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 787-1138 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 787-1138 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII