myRT

myRT report for GCA_902507185.1_SRRSH13

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Seq: CABWPQ010000176.1 (2333 bp)
Overview 1 RT 1: 60-2323 bp Neighborhood of RT #1 [60, 2331] RVT-GII int Feature: gene Location: 60-1547 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 465-1155 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 465-1 1 55 bp Feature: gene Location: 1553-1720 bp Feature: gene Location: 1963-2331 bp Feature: domain Description: int Location: 1966-2323 bp Feature: domain Description: int Location: 1 966-2323 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, int (PHA02601)

Seq: CABWPQ010000039.1 (103348 bp)
Overview 1 RT 1: 64500-71368 bp Neighborhood of RT #1 [64500, 71370] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 64500-65228 bp Feature: domain Description: FimC Location: 64548-65211 bp Feature: domain Description: FimC Location: 64548-652 11 bp Feature: gene Location: 65260-67869 bp Feature: domain Description: FimD Location: 65317-67858 bp Feature: domain Description: FimD Location: 65317-67858 bp Feature: gene Location: 67869-69947 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 68277-68721 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 682 77-6872 1 bp Feature: gene Location: 70004-70444 bp Feature: domain Description: Integrase_1 Location: 70010-70226 bp Feature: domain Description: Integrase_1 Location: 70010-702 2 6 bp Feature: gene Location: 70705-71370 bp Feature: domain Description: INT_P4_C Location: 70810-71368 bp Feature: domain Description: INT_P4_C Location: 70810-71368 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)

Seq: CABWPQ010000379.1 (395 bp)
Overview 1 RT 1: 1-394 bp Neighborhood of RT #1 [1, 393] RVT-GII Feature: gene Location: 1-393 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-394 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-3 94 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII