myRT

myRT report for GCA_902636465.1_WOLB0003

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Seq: CACPRH010000132.1 (2306 bp)
Overview 1 RT 1: 1-1960 bp Neighborhood of RT #1 [1, 2184] RVT_N RVT-GII YkfC Feature: gene Location: 1-201 bp Feature: gene Location: 456-599 bp Feature: gene Location: 637-2184 bp Feature: domain Description: RVT_N Location: 688-931 bp Feature: domain Description: RVT_N Location: 688-931 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 976-1627 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 976-1 627 bp Feature: domain Description: YkfC Location: 1627-1960 bp Feature: domain Description: YkfC Location: 1 627-1 960 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, YkfC (COG3344)

Seq: CACPRH010000110.1 (3310 bp)
Overview 1 RT 1: 1-3230 bp Neighborhood of RT #1 [1, 3230] PDDEXK_2 RVT_N RVT-GII RVT-GII GIIM T_den_put_tspse Feature: gene Location: 1-135 bp Feature: domain Description: PDDEXK_2 Location: 13-121 bp Feature: domain Description: PDDEXK_2 Location: 13-12 1 bp Feature: gene Location: 540-935 bp Feature: domain Description: RVT_N Location: 651-897 bp Feature: domain Description: RVT_N Location: 651-897 bp Feature: gene Location: 1008-1304 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1011-1233 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1011-12 33 bp Feature: gene Location: 1373-2032 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1394-1613 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1394-1613 bp Feature: domain Description: GIIM Note: maturase Location: 1706-1922 bp Feature: domain Description: GIIM Note: maturase Location: 1706-192 2 bp Feature: gene Location: 2264-2674 bp Feature: domain Description: T_den_put_tspse Location: 2369-2654 bp Feature: domain Description: T_den_put_tspse Location: 2 369-2 654 bp Feature: gene Location: 2889-3230 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PDDEXK_2 (pfam12784), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), T_den_put_tspse (TIGR01784)

Seq: CACPRH010000032.1 (12467 bp)
Overview 1 RT 1: 1146-4431 bp Neighborhood of RT #1 [1146, 4431] pcrA RVT-GII Feature: gene Location: 1146-1475 bp Feature: gene Location: 1603-3519 bp Feature: domain Description: pcrA Location: 1615-3499 bp Feature: domain Description: pcrA Location: 1615-3 499 bp Feature: gene Location: 3674-3886 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3677-3857 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 677-3 857 bp Feature: gene Location: 4049-4270 bp Feature: gene Location: 4303-4431 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT pcrA (TIGR01073), RVT-GII