myRT

myRT report for GCA_902636775.1_WOLB0056

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Seq: CACPTK010000154.1 (1788 bp)
Overview 1 RT 1: 70-1121 bp Neighborhood of RT #1 [70, 1228] RVT-UG26 Peptidase_A17 Feature: gene Location: 70-504 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 295-496 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 295-496 bp Feature: gene Location: 613-837 bp Feature: gene Location: 878-1228 bp Feature: domain Description: Peptidase_A17 Location: 881-1121 bp Feature: domain Description: Peptidase_A1 7 Location: 881 -1 1 21 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG26, Peptidase_A17 (pfam05380)

Seq: CACPTK010000141.1 (2292 bp)
Overview 1 RT 1: 763-2130 bp Neighborhood of RT #1 [763, 2291] RVT-UG26 Peptidase_A17 Feature: gene Location: 763-1137 bp Feature: gene Location: 1168-1479 bp Feature: gene Location: 1605-2291 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 1638-1842 bp Feature: RT Description: RVT-UG2 6 Note: UG2 6 RT Location: 1638-1842 bp Feature: domain Description: Peptidase_A17 Location: 2013-2130 bp Feature: domain Description: Peptidase_A17 Location: 2 013-2 130 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG26, Peptidase_A17 (pfam05380)

Seq: CACPTK010000169.1 (1487 bp)
Overview 1 RT 1: 177-1485 bp Neighborhood of RT #1 [177, 1485] RT_RNaseH_2 RVT-DGRs Feature: gene Location: 177-314 bp Feature: gene Location: 445-666 bp Feature: domain Description: RT_RNaseH_2 Location: 496-664 bp Feature: domain Description: RT_RNaseH_2 Location: 496-664 bp Feature: gene Location: 720-1034 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 750-960 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 750-960 bp Feature: gene Location: 1273-1485 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RT_RNaseH_2 (pfam17919), RVT-DGRs

Seq: CACPTK010000167.1 (1506 bp)
Overview 1 RT 1: 125-1232 bp Neighborhood of RT #1 [125, 1504] RVT_N RVT-GII GIIM Feature: gene Location: 125-1504 bp Feature: domain Description: RVT_N Location: 128-251 bp Feature: domain Description: RVT_N Location: 128-251 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 296-947 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 296-94 7 bp Feature: domain Description: GIIM Note: maturase Location: 998-1232 bp Feature: domain Description: GIIM Note: maturase Location: 998-1232 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: CACPTK010000015.1 (16781 bp)
Overview 1 RT 1: 1-8848 bp Neighborhood of RT #1 [1, 8913] HepA PRK07078 repA RVT-GII Virulence_RhuM Feature: gene Location: 1-1941 bp Feature: domain Description: HepA Location: 139-1918 bp Feature: domain Description: HepA Location: 139-1918 bp Feature: gene Location: 2649-4844 bp Feature: domain Description: PRK07078 Location: 2712-3630 bp Feature: domain Description: PRK07078 Location: 2712-3630 bp Feature: domain Description: repA Location: 3729-4488 bp Feature: domain Description: repA Location: 3729-4488 bp Feature: gene Location: 6010-7323 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6265-6955 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6265 -695 5 bp Feature: gene Location: 7494-7697 bp Feature: gene Location: 7909-8913 bp Feature: domain Description: Virulence_RhuM Location: 8098-8848 bp Feature: domain Description: Virulence_RhuM Location: 8098-8848 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HepA (COG0553), PRK07078 (hypothetical protein; Validated), repA, RVT-GII, Virulence_RhuM (pfam13310)