myRT

myRT report for GCA_902636895.1_WOLB0057

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Seq: CACPSU010000141.1 (2292 bp)
Overview 1 RT 1: 763-2130 bp Neighborhood of RT #1 [763, 2291] RVT-UG26 Peptidase_A17 Feature: gene Location: 763-1137 bp Feature: gene Location: 1168-1479 bp Feature: gene Location: 1605-2291 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 1638-1842 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 1 638-1 842 bp Feature: domain Description: Peptidase_A17 Location: 2013-2130 bp Feature: domain Description: Peptidase_A1 7 Location: 201 3-21 30 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG26, Peptidase_A17 (pfam05380)

Seq: CACPSU010000151.1 (2106 bp)
Overview 1 RT 1: 125-1853 bp Neighborhood of RT #1 [125, 1853] RVT_N RVT-GII GIIM Feature: gene Location: 125-1672 bp Feature: domain Description: RVT_N Location: 176-419 bp Feature: domain Description: RVT_N Location: 176-419 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1115 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1115 bp Feature: domain Description: GIIM Note: maturase Location: 1166-1400 bp Feature: domain Description: GIIM Note: maturase Location: 1166-1400 bp Feature: gene Location: 1710-1853 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: CACPSU010000163.1 (1788 bp)
Overview 1 RT 1: 70-1121 bp Neighborhood of RT #1 [70, 1228] RVT-UG26 Peptidase_A17 Feature: gene Location: 70-504 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 295-496 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 295-496 bp Feature: gene Location: 613-837 bp Feature: gene Location: 878-1228 bp Feature: domain Description: Peptidase_A17 Location: 881-1121 bp Feature: domain Description: Peptidase_A17 Location: 881-1121 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG26, Peptidase_A17 (pfam05380)

Seq: CACPSU010000169.1 (1699 bp)
Overview 1 RT 1: 389-1697 bp Neighborhood of RT #1 [389, 1697] RT_RNaseH_2 RVT-DGRs Feature: gene Location: 389-526 bp Feature: gene Location: 657-878 bp Feature: domain Description: RT_RNaseH_2 Location: 708-876 bp Feature: domain Description: RT_RNaseH_2 Location: 708-876 bp Feature: gene Location: 932-1246 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 962-1172 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 962-1172 bp Feature: gene Location: 1485-1697 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RT_RNaseH_2 (pfam17919), RVT-DGRs

Seq: CACPSU010000002.1 (26985 bp)
Overview 1 RT 1: 8083-18517 bp Neighborhood of RT #1 [8083, 18582] COG4279 HepA PRK07078 repA RVT-GII Virulence_RhuM Feature: gene Location: 8083-11610 bp Feature: domain Description: COG4279 Location: 8101-8629 bp Feature: domain Description: COG4279 Location: 8101-8629 bp Feature: domain Description: HepA Location: 9529-11587 bp Feature: domain Description: HepA Location: 95 29-115 87 bp Feature: gene Location: 12318-14513 bp Feature: domain Description: PRK07078 Location: 12381-13299 bp Feature: domain Description: PRK07078 Location: 12381-13299 bp Feature: domain Description: repA Location: 13398-14157 bp Feature: domain Description: repA Location: 13398-1415 7 bp Feature: gene Location: 15679-16992 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15934-16624 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15 934-16624 bp Feature: gene Location: 17163-17366 bp Feature: gene Location: 17578-18582 bp Feature: domain Description: Virulence_RhuM Location: 17767-18517 bp Feature: domain Description: Virulence_RhuM Location: 17767-185 17 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4279 (Uncharacterized conserved protein, contains Zn finger domain ), HepA (COG0553), PRK07078 (hypothetical protein; Validated), repA, RVT-GII, Virulence_RhuM (pfam13310)

Seq: CACPSU010000083.1 (5649 bp)
Overview 1 RT 1: 1-5647 bp Neighborhood of RT #1 [1, 5647] R1-I-EN RVT-GII Feature: gene Location: 1-2142 bp Feature: gene Location: 2135-5080 bp Feature: domain Description: R1-I-EN Location: 2162-2807 bp Feature: domain Description: R1-I-EN Location: 216 2-2807 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3872-4433 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3872-4433 bp Feature: gene Location: 5405-5647 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT R1-I-EN (cd09077), RVT-GII

Seq: CACPSU010000101.1 (4133 bp)
Overview 1 RT 1: 1-3158 bp Neighborhood of RT #1 [1, 3158] Integrase_H2C2 RNase_HI_RT_Ty3 RVT-DGRs Feature: gene Location: 1-234 bp Feature: domain Description: Integrase_H2C2 Location: 109-235 bp Feature: domain Description: Integrase_H2C2 Location: 109-235 bp Feature: gene Location: 369-608 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 375-471 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 37 5-47 1 bp Feature: gene Location: 903-1403 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 942-1143 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 942-1143 bp Feature: gene Location: 1643-1879 bp Feature: gene Location: 2748-3158 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Integrase_H2C2 (pfam17921), RNase_HI_RT_Ty3 (cd09274), RVT-DGRs

Seq: CACPSU010000147.1 (2178 bp)
Overview 1 RT 1: 1-1250 bp Neighborhood of RT #1 [1, 1250] RVT-GII Feature: gene Location: 1-276 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31-217 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31-217 bp Feature: gene Location: 352-765 bp Feature: gene Location: 834-1250 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII