myRT

myRT report for GCA_902636915.1_WOLB0058

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Seq: CACPSX010000078.1 (5990 bp)
Overview 1 RT 1: 3-5805 bp Neighborhood of RT #1 [3, 5805] R1-I-EN RVT-GII Feature: gene Location: 3-191 bp Feature: gene Location: 210-3431 bp Feature: domain Description: R1-I-EN Location: 237-882 bp Feature: domain Description: R1 -I-EN Location: 237-882 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1947-2508 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 947-2508 bp Feature: gene Location: 3424-5805 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT R1-I-EN (cd09077), RVT-GII

Seq: CACPSX010000153.1 (1921 bp)
Overview 1 RT 1: 112-1799 bp Neighborhood of RT #1 [112, 1799] RVT-GII Feature: gene Location: 112-1425 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 367-1057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 367-1057 bp Feature: gene Location: 1596-1799 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: CACPSX010000185.1 (1127 bp)
Overview 1 RT 1: 1-1126 bp Neighborhood of RT #1 [1, 1125] RVT_N RVT-GII GIIM Feature: gene Location: 1-1125 bp Feature: domain Description: RVT_N Location: 4-181 bp Feature: domain Description: RVT_N Location: 4-181 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 232-883 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23 2-883 bp Feature: domain Description: GIIM Note: maturase Location: 934-1126 bp Feature: domain Description: GIIM Note: maturase Location: 93 4-1126 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: CACPSX010000146.1 (2077 bp)
Overview 1 RT 1: 1-1410 bp Neighborhood of RT #1 [1, 1517] RT_pepA17 RVT-UG26 Peptidase_A17 Feature: gene Location: 1-414 bp Feature: domain Description: RT_pepA17 Location: 310-379 bp Feature: domain Description: RT_pepA17 Location: 310-379 bp Feature: gene Location: 359-793 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 584-785 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 584 -785 bp Feature: gene Location: 902-1126 bp Feature: gene Location: 1167-1517 bp Feature: domain Description: Peptidase_A17 Location: 1170-1410 bp Feature: domain Description: Peptidase_A17 Location: 1170-14 10 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RT_pepA17 (cd01644), RVT-UG26, Peptidase_A17 (pfam05380)

Seq: CACPSX010000122.1 (3221 bp)
Overview 1 RT 1: 90-2904 bp Neighborhood of RT #1 [90, 3218] RVT-UG11 Feature: gene Location: 90-1448 bp Feature: gene Location: 1565-1858 bp Feature: gene Location: 1884-3218 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 2700-2904 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 2700-2904 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG11

Seq: CACPSX010000073.1 (6310 bp)
Overview 1 RT 1: 83-6134 bp Neighborhood of RT #1 [83, 6134] Gypsy RVT-UNC RNase_HI_RT_Ty3 Integrase_H2C2 rve Feature: gene Location: 83-1492 bp Feature: domain Description: Gypsy Location: 98-1358 bp Feature: domain Description: Gypsy Location: 98-1358 bp Feature: gene Location: 1552-4686 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 2533-2707 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 2533-2707 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 3061-3403 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 306 1-3403 bp Feature: domain Description: Integrase_H2C2 Location: 3808-3952 bp Feature: domain Description: Integrase_H2C2 Location: 3808-3952 bp Feature: domain Description: rve Location: 4003-4309 bp Feature: domain Description: rve Location: 4003-4309 bp Feature: gene Location: 4896-6134 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Gypsy (pfam07253), RVT-UG13/RVT-UG23/RVT-DGRs/RVT-Retrons(RVT-UNC), RNase_HI_RT_Ty3 (cd09274), Integrase_H2C2 (pfam17921), rve (pfam00665)

Seq: CACPSX010000137.1 (2290 bp)
Overview 1 RT 1: 763-2128 bp Neighborhood of RT #1 [763, 2289] RVT-UG26 Peptidase_A17 Feature: gene Location: 763-1086 bp Feature: gene Location: 1166-1477 bp Feature: gene Location: 1603-2289 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 1636-1840 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 1636-1840 bp Feature: domain Description: Peptidase_A17 Location: 2011-2128 bp Feature: domain Description: Peptidase_A17 Location: 2011-2128 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG26, Peptidase_A17 (pfam05380)

Seq: CACPSX010000135.1 (2308 bp)
Overview 1 RT 1: 125-2305 bp Neighborhood of RT #1 [125, 2305] RVT_N RVT-GII GIIM Feature: gene Location: 125-1672 bp Feature: domain Description: RVT_N Location: 176-419 bp Feature: domain Description: RVT_N Location: 176-419 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1115 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1115 bp Feature: domain Description: GIIM Note: maturase Location: 1166-1400 bp Feature: domain Description: GIIM Note: maturase Location: 1166-1400 bp Feature: gene Location: 1710-1853 bp Feature: gene Location: 2108-2305 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)