myRT

myRT report for GCA_902636935.1_WOLB0059

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Seq: CACPSZ010000068.1 (6765 bp)
Overview 1 RT 1: 2181-4312 bp Neighborhood of RT #1 [2181, 4312] RVT-CRISPR-like Feature: gene Location: 2181-2474 bp Feature: gene Location: 2476-2910 bp Feature: gene Location: 3013-3723 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 3064-3628 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 3064-3628 bp Feature: gene Location: 3729-3953 bp Feature: gene Location: 3974-4312 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: CACPSZ010000196.1 (1444 bp)
Overview 1 RT 1: 14-1387 bp Neighborhood of RT #1 [14, 1443] RVT-UNC RT_RNaseH_2 RP_Saci_like Feature: gene Location: 14-820 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 173-380 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 173-380 bp Feature: domain Description: RT_RNaseH_2 Location: 587-719 bp Feature: domain Description: RT_RNaseH_2 Location: 587-719 bp Feature: gene Location: 930-1160 bp Feature: gene Location: 1252-1443 bp Feature: domain Description: RP_Saci_like Location: 1261-1387 bp Feature: domain Description: RP_Saci_like Location: 12 61-1387 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG11/RVT-DGRs/RVT-UG26/RVT-UG17(RVT-UNC), RT_RNaseH_2 (pfam17919), RP_Saci_like (cd06094)

Seq: CACPSZ010000194.1 (1489 bp)
Overview 1 RT 1: 3-1412 bp Neighborhood of RT #1 [3, 1420] Integrase_H2C2 Peptidase_A17 RVT-UG26 Feature: gene Location: 3-212 bp Feature: domain Description: Integrase_H2C2 Location: 93-213 bp Feature: domain Description: Integrase_H2C2 Location: 93 -213 bp Feature: gene Location: 262-612 bp Feature: domain Description: Peptidase_A17 Location: 265-505 bp Feature: domain Description: Peptidase_A17 Location: 265-505 bp Feature: gene Location: 986-1420 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 1211-1412 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 1211-1412 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Integrase_H2C2 (pfam17921), Peptidase_A17 (pfam05380), RVT-UG26

Seq: CACPSZ010000206.1 (1197 bp)
Overview 1 RT 1: 57-828 bp Neighborhood of RT #1 [57, 1196] RVT-GII Feature: gene Location: 57-1196 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 138-828 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 138-828 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: CACPSZ010000105.1 (4346 bp)
Overview 1 RT 1: 3-4130 bp Neighborhood of RT #1 [3, 4264] RVT-UNC RNase_HI_RT_Ty3 Integrase_H2C2 rve Gypsy Feature: gene Location: 3-2795 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 642-816 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 642-816 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 1170-1512 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 1170-15 12 bp Feature: domain Description: Integrase_H2C2 Location: 1917-2061 bp Feature: domain Description: Integrase_H2C2 Location: 1917-2061 bp Feature: domain Description: rve Location: 2112-2418 bp Feature: domain Description: rve Location: 2112-2418 bp Feature: gene Location: 2819-4264 bp Feature: domain Description: Gypsy Location: 2870-4130 bp Feature: domain Description: Gypsy Location: 2870-4130 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG13/RVT-UG23/RVT-DGRs/RVT-Retrons(RVT-UNC), RNase_HI_RT_Ty3 (cd09274), Integrase_H2C2 (pfam17921), rve (pfam00665), Gypsy (pfam07253)

Seq: CACPSZ010000172.1 (1886 bp)
Overview 1 RT 1: 3-1883 bp Neighborhood of RT #1 [3, 1883] RVT_N RVT-GII GIIM Feature: gene Location: 3-1250 bp Feature: domain Description: RVT_N Location: 54-297 bp Feature: domain Description: RVT_N Location: 54-297 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 342-993 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 342-993 bp Feature: domain Description: GIIM Note: maturase Location: 1044-1248 bp Feature: domain Description: GIIM Note: maturase Location: 1044-1248 bp Feature: gene Location: 1288-1431 bp Feature: gene Location: 1686-1883 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)