myRT

myRT report for GCA_902643695.1_WOLB0705

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Seq: CACQRN010000089.1 (3784 bp)
Overview 1 RT 1: 1517-3739 bp Neighborhood of RT #1 [1517, 3783] PDDEXK_2 RVT_N RVT-GII RVT-GII GIIM Feature: gene Location: 1517-1924 bp Feature: domain Description: PDDEXK_2 Location: 1595-1910 bp Feature: domain Description: PDDEXK_2 Location: 1 595-1 91 0 bp Feature: gene Location: 1960-2091 bp Feature: gene Location: 2345-3094 bp Feature: domain Description: RVT_N Location: 2456-2702 bp Feature: domain Description: RVT_N Location: 2456-2702 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2744-3056 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2744-3056 bp Feature: gene Location: 3055-3783 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3115-3430 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 1 5-3430 bp Feature: domain Description: GIIM Note: maturase Location: 3523-3739 bp Feature: domain Description: GIIM Note: maturase Location: 3523-3739 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PDDEXK_2 (pfam12784), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: CACQRN010000108.1 (2298 bp)
Overview 1 RT 1: 1-1901 bp Neighborhood of RT #1 [1, 2173] RVT_N RVT-GII GIIM Feature: gene Location: 1-204 bp Feature: gene Location: 296-586 bp Feature: gene Location: 626-2173 bp Feature: domain Description: RVT_N Location: 677-914 bp Feature: domain Description: RVT_N Location: 677-914 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 965-1616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 965-1616 bp Feature: domain Description: GIIM Note: maturase Location: 1667-1901 bp Feature: domain Description: GIIM Note: maturase Location: 1667-1901 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: CACQRN010000003.1 (26698 bp)
Overview 1 RT 1: 20741-26517 bp Neighborhood of RT #1 [20741, 26517] MiaB-like-C gatA RVT-GII Feature: gene Location: 20741-21967 bp Feature: domain Description: MiaB-like-C Location: 20756-21920 bp Feature: domain Description: MiaB-like-C Location: 20756-21920 bp Feature: gene Location: 22357-23826 bp Feature: domain Description: gatA Location: 22405-23791 bp Feature: domain Description: gatA Location: 22405-23 791 bp Feature: gene Location: 24188-25501 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24443-25133 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24443 -2513 3 bp Feature: gene Location: 25672-25875 bp Feature: gene Location: 25975-26517 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MiaB-like-C (TIGR01579), gatA (TIGR00132), RVT-GII

Seq: CACQRN010000010.1 (19824 bp)
Overview 1 RT 1: 10435-14688 bp Neighborhood of RT #1 [10435, 15515] ANK PHA03095 RVT_N RVT-GII GIIM ANK Ank_4 Tail_P2_I Feature: gene Location: 10435-10896 bp Feature: domain Description: ANK Location: 10450-10744 bp Feature: domain Description: ANK Location: 104 50-1074 4 bp Feature: gene Location: 11283-11546 bp Feature: domain Description: PHA03095 Location: 11289-11490 bp Feature: domain Description: PHA03095 Location: 11289-114 90 bp Feature: gene Location: 11802-13340 bp Feature: domain Description: RVT_N Location: 11853-12096 bp Feature: domain Description: RVT_N Location: 11853-12096 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12141-12834 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1214 1-12834 bp Feature: domain Description: GIIM Note: maturase Location: 12930-13143 bp Feature: domain Description: GIIM Note: maturase Location: 12930-1314 3 bp Feature: gene Location: 13783-14193 bp Feature: domain Description: ANK Location: 13867-14023 bp Feature: domain Description: ANK Location: 13867-14 023 bp Feature: domain Description: Ank_4 Location: 14035-14149 bp Feature: domain Description: Ank_4 Location: 14 035-14 14 9 bp Feature: gene Location: 14355-15515 bp Feature: domain Description: Tail_P2_I Location: 14364-14688 bp Feature: domain Description: Tail_P2_I Location: 14 364 -14 688 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ANK (smart00248), PHA03095 (ankyrin-like protein; Provisional), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), Ank_4 (pfam13637), Tail_P2_I (pfam09684)

Seq: CACQRN010000004.1 (23727 bp)
Overview 1 RT 1: 18292-21675 bp Neighborhood of RT #1 [18292, 21675] pcrA RVT-GII Feature: gene Location: 18292-18621 bp Feature: gene Location: 18848-20764 bp Feature: domain Description: pcrA Location: 18860-20744 bp Feature: domain Description: pcrA Location: 18860-20744 bp Feature: gene Location: 20988-21131 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20991-21126 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20991-21126 bp Feature: gene Location: 21294-21515 bp Feature: gene Location: 21541-21675 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT pcrA (TIGR01073), RVT-GII