myRT

myRT report for GCA_902644255.1_WOLB0762

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Seq: CACQTW010000140.1 (1632 bp)
Overview 1 RT 1: 219-1630 bp Neighborhood of RT #1 [219, 1629] RVT_N RVT-GII GIIM Feature: gene Location: 219-362 bp Feature: gene Location: 400-1629 bp Feature: domain Description: RVT_N Location: 451-688 bp Feature: domain Description: RVT_N Location: 451 -688 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 739-1390 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 739-1 390 bp Feature: domain Description: GIIM Note: maturase Location: 1441-1630 bp Feature: domain Description: GIIM Note: maturase Location: 1 441 -1 630 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: CACQTW010000125.1 (2567 bp)
Overview 1 RT 1: 100-2188 bp Neighborhood of RT #1 [100, 2565] RVT-UG11 RNase_HI_RT_Ty3 Integrase_H2C2 rve Feature: gene Location: 100-2565 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 430-595 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 430-595 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 946-1291 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 946-12 91 bp Feature: domain Description: Integrase_H2C2 Location: 1687-1831 bp Feature: domain Description: Integrase_H2 C2 Location: 1687-1831 bp Feature: domain Description: rve Location: 1882-2188 bp Feature: domain Description: rve Location: 1882 -2 188 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG11, RNase_HI_RT_Ty3 (cd09274), Integrase_H2C2 (pfam17921), rve (pfam00665)

Seq: CACQTW010000033.1 (12860 bp)
Overview 1 RT 1: 2-4934 bp Neighborhood of RT #1 [2, 4939] RVT_N RVT-GII GIIM PDDEXK_2 PRK10263 FtsK Feature: gene Location: 2-220 bp Feature: gene Location: 217-1764 bp Feature: domain Description: RVT_N Location: 268-511 bp Feature: domain Description: RVT_N Location: 268-511 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 556-1207 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 556-1207 bp Feature: domain Description: GIIM Note: maturase Location: 1258-1492 bp Feature: domain Description: GIIM Note: maturase Location: 1258-1492 bp Feature: gene Location: 2200-2643 bp Feature: domain Description: PDDEXK_2 Location: 2227-2446 bp Feature: domain Description: PDDEXK_2 Location: 2227-2446 bp Feature: gene Location: 2825-4939 bp Feature: domain Description: PRK10263 Location: 2837-3041 bp Feature: domain Description: PRK10263 Location: 283 7-3 041 bp Feature: domain Description: FtsK Location: 3389-4934 bp Feature: domain Description: FtsK Location: 3 3 89-493 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), PDDEXK_2 (pfam12784), PRK10263 (DNA translocase FtsK; Provisional), FtsK (COG1674)

Seq: CACQTW010000004.1 (24365 bp)
Overview 1 RT 1: 17479-23387 bp Neighborhood of RT #1 [17479, 23743] Virulence_RhuM RVT-GII PRK07078 repA Feature: gene Location: 17479-18483 bp Feature: domain Description: Virulence_RhuM Location: 17668-18418 bp Feature: domain Description: Virulence_RhuM Location: 17668-184 18 bp Feature: gene Location: 18695-18898 bp Feature: gene Location: 19069-20382 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19324-20014 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19324 -20014 bp Feature: gene Location: 20295-20567 bp Feature: gene Location: 21548-23743 bp Feature: domain Description: PRK07078 Location: 21611-22529 bp Feature: domain Description: PRK07078 Location: 21611-22529 bp Feature: domain Description: repA Location: 22628-23387 bp Feature: domain Description: repA Location: 22628-23387 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Virulence_RhuM (pfam13310), RVT-GII, PRK07078 (hypothetical protein; Validated), repA