myRT

myRT report for GCA_902645675.1_WOLB0895

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Seq: CACQZD010000161.1 (2117 bp)
Overview 1 RT 1: 56-1882 bp Neighborhood of RT #1 [56, 1882] RVT-UG11 RNase_HI_RT_Ty3 Feature: gene Location: 56-1246 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 167-332 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 1 67-332 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 683-1028 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 683-1 028 bp Feature: gene Location: 1476-1676 bp Feature: gene Location: 1721-1882 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG11, RNase_HI_RT_Ty3 (cd09274)

Seq: CACQZD010000182.1 (1721 bp)
Overview 1 RT 1: 219-1648 bp Neighborhood of RT #1 [219, 1719] RVT_N RVT-GII GIIM Feature: gene Location: 219-362 bp Feature: gene Location: 400-1719 bp Feature: domain Description: RVT_N Location: 451-688 bp Feature: domain Description: RVT_N Location: 451-688 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 739-1390 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 739-1390 bp Feature: domain Description: GIIM Note: maturase Location: 1441-1648 bp Feature: domain Description: GIIM Note: maturase Location: 1441-1648 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: CACQZD010000003.1 (24365 bp)
Overview 1 RT 1: 17479-23387 bp Neighborhood of RT #1 [17479, 23743] Virulence_RhuM RVT-GII PRK07078 repA Feature: gene Location: 17479-18483 bp Feature: domain Description: Virulence_RhuM Location: 17668-18418 bp Feature: domain Description: Virulence_RhuM Location: 17668-18418 bp Feature: gene Location: 18695-18898 bp Feature: gene Location: 19069-20382 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19324-20014 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 193 24-20014 bp Feature: gene Location: 20295-20567 bp Feature: gene Location: 21548-23743 bp Feature: domain Description: PRK07078 Location: 21611-22529 bp Feature: domain Description: PRK07078 Location: 21611-22529 bp Feature: domain Description: repA Location: 22628-23387 bp Feature: domain Description: repA Location: 22628-23 3 87 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Virulence_RhuM (pfam13310), RVT-GII, PRK07078 (hypothetical protein; Validated), repA

Seq: CACQZD010000156.1 (2308 bp)
Overview 1 RT 1: 125-2305 bp Neighborhood of RT #1 [125, 2305] RVT_N RVT-GII GIIM Feature: gene Location: 125-1672 bp Feature: domain Description: RVT_N Location: 176-419 bp Feature: domain Description: RVT_N Location: 176-4 19 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1115 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 64 -1115 bp Feature: domain Description: GIIM Note: maturase Location: 1166-1400 bp Feature: domain Description: GIIM Note: maturase Location: 1166-14 00 bp Feature: gene Location: 1710-1853 bp Feature: gene Location: 2108-2305 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)