myRT

myRT report for GCA_902645805.1_WOLB0916

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Seq: CACQZQ010000185.1 (1632 bp)
Overview 1 RT 1: 219-1630 bp Neighborhood of RT #1 [219, 1629] RVT_N RVT-GII GIIM Feature: gene Location: 219-362 bp Feature: gene Location: 400-1629 bp Feature: domain Description: RVT_N Location: 451-688 bp Feature: domain Description: RVT_N Location: 451 -688 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 739-1390 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 739-1 390 bp Feature: domain Description: GIIM Note: maturase Location: 1441-1630 bp Feature: domain Description: GIIM Note: maturase Location: 1 441 -1 630 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: CACQZQ010000059.1 (6761 bp)
Overview 1 RT 1: 561-4451 bp Neighborhood of RT #1 [561, 4451] PDDEXK_2 RVT_N RVT-GII GIIM PDDEXK_2 Feature: gene Location: 561-1004 bp Feature: domain Description: PDDEXK_2 Location: 588-807 bp Feature: domain Description: PDDEXK_2 Location: 588-807 bp Feature: gene Location: 1259-1402 bp Feature: gene Location: 1440-2987 bp Feature: domain Description: RVT_N Location: 1491-1734 bp Feature: domain Description: RVT_N Location: 1491-1734 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1779-2430 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1779-2 430 bp Feature: domain Description: GIIM Note: maturase Location: 2481-2715 bp Feature: domain Description: GIIM Note: maturase Location: 2 481-2 715 bp Feature: gene Location: 2984-3718 bp Feature: domain Description: PDDEXK_2 Location: 3110-3575 bp Feature: domain Description: PDDEXK_2 Location: 3110-3575 bp Feature: gene Location: 3915-4451 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PDDEXK_2 (pfam12784), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: CACQZQ010000142.1 (2656 bp)
Overview 1 RT 1: 3-2463 bp Neighborhood of RT #1 [3, 2654] RVT-UG11 RNase_HI_RT_Ty3 Integrase_H2C2 rve Feature: gene Location: 3-1874 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 726-867 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 726-867 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 1221-1566 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 1221-1566 bp Feature: gene Location: 1935-2654 bp Feature: domain Description: Integrase_H2C2 Location: 1962-2106 bp Feature: domain Description: Integrase_H2C2 Location: 1962-2106 bp Feature: domain Description: rve Location: 2154-2463 bp Feature: domain Description: rve Location: 2154-2463 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG11, RNase_HI_RT_Ty3 (cd09274), Integrase_H2C2 (pfam17921), rve (pfam00665)

Seq: CACQZQ010000003.1 (24363 bp)
Overview 1 RT 1: 623-6822 bp Neighborhood of RT #1 [623, 6887] PRK07078 repA RVT-GII Virulence_RhuM Feature: gene Location: 623-2818 bp Feature: domain Description: PRK07078 Location: 686-1604 bp Feature: domain Description: PRK07078 Location: 686-1604 bp Feature: domain Description: repA Location: 1703-2462 bp Feature: domain Description: repA Location: 1703-24 62 bp Feature: gene Location: 3984-5297 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4239-4929 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 239-4 929 bp Feature: gene Location: 5468-5671 bp Feature: gene Location: 5883-6887 bp Feature: domain Description: Virulence_RhuM Location: 6072-6822 bp Feature: domain Description: Virulence_RhuM Location: 6072-6822 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK07078 (hypothetical protein; Validated), repA, RVT-GII, Virulence_RhuM (pfam13310)