myRT

myRT report for GCA_902645935.1_WOLB0929

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Seq: CACRAH010000211.1 (1633 bp)
Overview 1 RT 1: 220-1631 bp Neighborhood of RT #1 [220, 1630] RVT_N RVT-GII GIIM Feature: gene Location: 220-363 bp Feature: gene Location: 401-1630 bp Feature: domain Description: RVT_N Location: 452-689 bp Feature: domain Description: RVT_N Location: 452-689 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 740-1391 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 740-1 391 bp Feature: domain Description: GIIM Note: maturase Location: 1442-1631 bp Feature: domain Description: GIIM Note: maturase Location: 1 442-1 631 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: CACRAH010000156.1 (2706 bp)
Overview 1 RT 1: 1-1912 bp Neighborhood of RT #1 [1, 2184] RVT_N RVT-GII GIIM Feature: gene Location: 1-201 bp Feature: gene Location: 456-599 bp Feature: gene Location: 637-2184 bp Feature: domain Description: RVT_N Location: 688-931 bp Feature: domain Description: RVT_N Location: 688-931 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 976-1627 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 976-162 7 bp Feature: domain Description: GIIM Note: maturase Location: 1678-1912 bp Feature: domain Description: GIIM Note: maturase Location: 1678-1912 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: CACRAH010000167.1 (2390 bp)
Overview 1 RT 1: 2-1757 bp Neighborhood of RT #1 [2, 1945] RVT-UNC RNase_HI_RT_Ty3 Integrase_H2C2 rve Feature: gene Location: 2-151 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 8-146 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 8-146 bp Feature: gene Location: 245-1945 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 515-860 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 515-860 bp Feature: domain Description: Integrase_H2C2 Location: 1256-1400 bp Feature: domain Description: Integrase_H2C2 Location: 1256-1400 bp Feature: domain Description: rve Location: 1448-1757 bp Feature: domain Description: rve Location: 1448-1757 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG23/RVT-UG13/RVT-UG26/RVT-UG11(RVT-UNC), RNase_HI_RT_Ty3 (cd09274), Integrase_H2C2 (pfam17921), rve (pfam00665)

Seq: CACRAH010000003.1 (24369 bp)
Overview 1 RT 1: 627-6826 bp Neighborhood of RT #1 [627, 6891] PRK07078 repA RVT-GII Virulence_RhuM Feature: gene Location: 627-2822 bp Feature: domain Description: PRK07078 Location: 690-1608 bp Feature: domain Description: PRK07078 Location: 690-1608 bp Feature: domain Description: repA Location: 1707-2466 bp Feature: domain Description: repA Location: 1707-24 66 bp Feature: gene Location: 3988-5301 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4243-4933 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 24 3-4 933 bp Feature: gene Location: 5472-5675 bp Feature: gene Location: 5887-6891 bp Feature: domain Description: Virulence_RhuM Location: 6076-6826 bp Feature: domain Description: Virulence_RhuM Location: 6076-6826 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK07078 (hypothetical protein; Validated), repA, RVT-GII, Virulence_RhuM (pfam13310)