myRT

myRT report for GCA_902646085.1_WOLB0070

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Seq: CACRBB010000192.1 (2290 bp)
Overview 1 RT 1: 763-2128 bp Neighborhood of RT #1 [763, 2289] RVT-UG26 Peptidase_A17 Feature: gene Location: 763-1086 bp Feature: gene Location: 1166-1477 bp Feature: gene Location: 1603-2289 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 1636-1840 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 1 636-1 840 bp Feature: domain Description: Peptidase_A17 Location: 2011-2128 bp Feature: domain Description: Peptidase_A1 7 Location: 201 1 -21 28 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG26, Peptidase_A17 (pfam05380)

Seq: CACRBB010000328.1 (1348 bp)
Overview 1 RT 1: 38-1346 bp Neighborhood of RT #1 [38, 1346] RT_RNaseH_2 RVT-UNC Feature: gene Location: 38-175 bp Feature: gene Location: 306-527 bp Feature: domain Description: RT_RNaseH_2 Location: 357-525 bp Feature: domain Description: RT_RNaseH_2 Location: 357-52 5 bp Feature: gene Location: 581-1183 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 899-1109 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 899-1109 bp Feature: gene Location: 1134-1346 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RT_RNaseH_2 (pfam17919), RVT-DGRs/RVT-UG26/RVT-UG10(RVT-UNC)

Seq: CACRBB010000171.1 (2591 bp)
Overview 1 RT 1: 1-1247 bp Neighborhood of RT #1 [1, 1247] RVT-GII Feature: gene Location: 1-276 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31-217 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 1-217 bp Feature: gene Location: 352-765 bp Feature: gene Location: 834-1247 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: CACRBB010000055.1 (5278 bp)
Overview 1 RT 1: 1-5272 bp Neighborhood of RT #1 [1, 5277] retropepsin_like Spuma_A9PTase RVT-UNC RNase_HI_RT_Ty3 Integrase_H2C2 rve Gypsy Feature: gene Location: 1-873 bp Feature: gene Location: 894-3977 bp Feature: domain Description: retropepsin_like Location: 906-1182 bp Feature: domain Description: retropepsin_like Location: 906-1182 bp Feature: domain Description: Spuma_A9PTase Location: 1224-1485 bp Feature: domain Description: Spuma_A9PTase Location: 1224 -14 85 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1869-2073 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1869-2073 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 2364-2712 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 2364 -2712 bp Feature: domain Description: Integrase_H2C2 Location: 3132-3273 bp Feature: domain Description: Integrase_H2C2 Location: 3132-3273 bp Feature: domain Description: rve Location: 3327-3630 bp Feature: domain Description: rve Location: 3327-3630 bp Feature: gene Location: 4087-5277 bp Feature: domain Description: Gypsy Location: 4207-5272 bp Feature: domain Description: Gypsy Location: 4 207-5272 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT retropepsin_like (cd00303), Spuma_A9PTase (pfam03539), RVT-DGRs/RVT-UG26/RVT-UG4/RVT-UNC(RVT-UNC), RNase_HI_RT_Ty3 (cd09274), Integrase_H2C2 (pfam17921), rve (pfam00665), Gypsy (pfam07253)

Seq: CACRBB010000288.1 (1574 bp)
Overview 1 RT 1: 48-1543 bp Neighborhood of RT #1 [48, 1572] RVT_N RVT-GII YkfC Feature: gene Location: 48-191 bp Feature: gene Location: 229-1572 bp Feature: domain Description: RVT_N Location: 280-523 bp Feature: domain Description: RVT_N Location: 280-5 23 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 568-1219 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5 68-1219 bp Feature: domain Description: YkfC Location: 1219-1543 bp Feature: domain Description: YkfC Location: 1219-15 43 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, YkfC (COG3344)

Seq: CACRBB010000256.1 (1788 bp)
Overview 1 RT 1: 70-1121 bp Neighborhood of RT #1 [70, 1228] RVT-UG26 Peptidase_A17 Feature: gene Location: 70-504 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 295-496 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 295-496 bp Feature: gene Location: 613-837 bp Feature: gene Location: 878-1228 bp Feature: domain Description: Peptidase_A17 Location: 881-1121 bp Feature: domain Description: Peptidase_A17 Location: 881-1121 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG26, Peptidase_A17 (pfam05380)

Seq: CACRBB010000023.1 (7753 bp)
Overview 1 RT 1: 4187-7275 bp Neighborhood of RT #1 [4187, 7275] Virulence_RhuM RVT-GII Feature: gene Location: 4187-5191 bp Feature: domain Description: Virulence_RhuM Location: 4376-5126 bp Feature: domain Description: Virulence_RhuM Location: 437 6-5126 bp Feature: gene Location: 5403-5606 bp Feature: gene Location: 5777-7090 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6032-6722 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6032-67 22 bp Feature: gene Location: 7003-7275 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Virulence_RhuM (pfam13310), RVT-GII