myRT

myRT report for GCA_902646165.1_WOLB0072

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Seq: CACRAZ010000231.1 (1900 bp)
Overview 1 RT 1: 48-1504 bp Neighborhood of RT #1 [48, 1776] RVT_N RVT-GII GIIM Feature: gene Location: 48-191 bp Feature: gene Location: 229-1776 bp Feature: domain Description: RVT_N Location: 280-523 bp Feature: domain Description: RVT_N Location: 280-523 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 568-1219 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 568-1 21 9 bp Feature: domain Description: GIIM Note: maturase Location: 1270-1504 bp Feature: domain Description: GIIM Note: maturase Location: 1 270-1 504 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: CACRAZ010000242.1 (1814 bp)
Overview 1 RT 1: 1-1463 bp Neighborhood of RT #1 [1, 1463] RVT-GII Feature: gene Location: 1-1278 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 220-910 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 2 0-910 bp Feature: gene Location: 1191-1463 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: CACRAZ010000048.1 (5782 bp)
Overview 1 RT 1: 1-5777 bp Neighborhood of RT #1 [1, 5779] RVT-UNC RNase_HI_RT_Ty3 Integrase_H2C2 rve Gypsy Feature: gene Location: 1-1335 bp Feature: gene Location: 1545-4679 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 2535-2700 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 253 5-2700 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 3054-3396 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 3 054-3 3 96 bp Feature: domain Description: Integrase_H2C2 Location: 3801-3945 bp Feature: domain Description: Integrase_H2C2 Location: 3 801-3 945 bp Feature: domain Description: rve Location: 3996-4302 bp Feature: domain Description: rve Location: 3 996-43 02 bp Feature: gene Location: 4739-5779 bp Feature: domain Description: Gypsy Location: 4754-5777 bp Feature: domain Description: Gypsy Location: 4754-5777 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG23/RVT-UG13/RVT-UG7/RVT-Retrons(RVT-UNC), RNase_HI_RT_Ty3 (cd09274), Integrase_H2C2 (pfam17921), rve (pfam00665), Gypsy (pfam07253)

Seq: CACRAZ010000189.1 (2292 bp)
Overview 1 RT 1: 763-2130 bp Neighborhood of RT #1 [763, 2291] RVT-UG26 Peptidase_A17 Feature: gene Location: 763-1137 bp Feature: gene Location: 1168-1479 bp Feature: gene Location: 1605-2291 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 1638-1842 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 1638-184 2 bp Feature: domain Description: Peptidase_A17 Location: 2013-2130 bp Feature: domain Description: Peptidase_A17 Location: 2013-2130 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG26, Peptidase_A17 (pfam05380)

Seq: CACRAZ010000257.1 (1710 bp)
Overview 1 RT 1: 135-411 bp Neighborhood of RT #1 [135, 461] RT_LTR RVT-UNC Feature: gene Location: 135-263 bp Feature: domain Description: RT_LTR Location: 138-261 bp Feature: domain Description: RT_LTR Location: 138-261 bp Feature: gene Location: 270-461 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 285-411 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 285 -411 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RT_LTR (cd01647), RVT-UG23/RVT-UG7/RVT-UG26/RVT-DGRs(RVT-UNC)

Seq: CACRAZ010000253.1 (1748 bp)
Overview 1 RT 1: 33-1084 bp Neighborhood of RT #1 [33, 1191] RVT-UG26 Peptidase_A17 Feature: gene Location: 33-467 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 258-459 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 258-459 bp Feature: gene Location: 576-800 bp Feature: gene Location: 841-1191 bp Feature: domain Description: Peptidase_A17 Location: 844-1084 bp Feature: domain Description: Peptidase_A17 Location: 844-1084 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG26, Peptidase_A17 (pfam05380)