myRT

myRT report for GCA_902646215.1_WOLB0074

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Seq: CACRCA010000036.1 (6279 bp)
Overview 1 RT 1: 3-6060 bp Neighborhood of RT #1 [3, 6197] RVT-UNC RNase_HI_RT_Ty3 Integrase_H2C2 rve Gypsy Feature: gene Location: 3-1382 bp Feature: gene Location: 1592-4726 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 2573-2747 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 2573-2747 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 3101-3443 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 31 01 -3443 bp Feature: domain Description: Integrase_H2C2 Location: 3848-3992 bp Feature: domain Description: Integrase_H2C2 Location: 3848-3992 bp Feature: domain Description: rve Location: 4043-4349 bp Feature: domain Description: rve Location: 4043-4349 bp Feature: gene Location: 4788-6197 bp Feature: domain Description: Gypsy Location: 4803-6060 bp Feature: domain Description: Gypsy Location: 4803-6060 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG13/RVT-UG23/RVT-DGRs/RVT-Retrons(RVT-UNC), RNase_HI_RT_Ty3 (cd09274), Integrase_H2C2 (pfam17921), rve (pfam00665), Gypsy (pfam07253)

Seq: CACRCA010000288.1 (1574 bp)
Overview 1 RT 1: 48-1543 bp Neighborhood of RT #1 [48, 1572] RVT_N RVT-GII YkfC Feature: gene Location: 48-191 bp Feature: gene Location: 229-1572 bp Feature: domain Description: RVT_N Location: 280-523 bp Feature: domain Description: RVT_N Location: 2 80-52 3 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 568-1219 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 568-12 19 bp Feature: domain Description: YkfC Location: 1219-1543 bp Feature: domain Description: YkfC Location: 12 19-1543 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, YkfC (COG3344)

Seq: CACRCA010000249.1 (1814 bp)
Overview 1 RT 1: 1-1463 bp Neighborhood of RT #1 [1, 1463] RVT-GII Feature: gene Location: 1-1278 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 220-910 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 220-910 bp Feature: gene Location: 1191-1463 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: CACRCA010000256.1 (1788 bp)
Overview 1 RT 1: 70-1121 bp Neighborhood of RT #1 [70, 1228] RVT-UG26 Peptidase_A17 Feature: gene Location: 70-504 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 295-496 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 295-4 96 bp Feature: gene Location: 613-837 bp Feature: gene Location: 878-1228 bp Feature: domain Description: Peptidase_A17 Location: 881-1121 bp Feature: domain Description: Peptidase_A17 Location: 881-1121 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG26, Peptidase_A17 (pfam05380)

Seq: CACRCA010000046.1 (5615 bp)
Overview 1 RT 1: 3-4411 bp Neighborhood of RT #1 [3, 5385] R1-I-EN RVT-GII Feature: gene Location: 3-2171 bp Feature: gene Location: 2164-5385 bp Feature: domain Description: R1-I-EN Location: 2191-2836 bp Feature: domain Description: R1-I-EN Location: 2191-2836 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3901-4411 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3901-4411 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT R1-I-EN (cd09077), RVT-GII

Seq: CACRCA010000189.1 (2292 bp)
Overview 1 RT 1: 763-2130 bp Neighborhood of RT #1 [763, 2291] RVT-UG26 Peptidase_A17 Feature: gene Location: 763-1137 bp Feature: gene Location: 1168-1479 bp Feature: gene Location: 1605-2291 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 1638-1842 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 16 38-1842 bp Feature: domain Description: Peptidase_A17 Location: 2013-2130 bp Feature: domain Description: Peptidase_A17 Location: 2013-2130 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG26, Peptidase_A17 (pfam05380)