myRT

myRT report for GCA_902646325.1_WOLB0952

Download annotations/find similar RTs

Seq: CACRBJ010000124.1 (2308 bp)
Overview 1 RT 1: 125-2305 bp Neighborhood of RT #1 [125, 2305] RVT_N RVT-GII GIIM Feature: gene Location: 125-1672 bp Feature: domain Description: RVT_N Location: 176-419 bp Feature: domain Description: RVT_N Location: 1 76-41 9 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1115 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1 1 1 5 bp Feature: domain Description: GIIM Note: maturase Location: 1166-1400 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 66-1 400 bp Feature: gene Location: 1710-1853 bp Feature: gene Location: 2108-2305 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: CACRBJ010000129.1 (1991 bp)
Overview 1 RT 1: 3-1533 bp Neighborhood of RT #1 [3, 1787] RVT-UNC Integrase_H2C2 Feature: gene Location: 3-479 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 228-429 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 2 2 8-42 9 bp Feature: gene Location: 1398-1787 bp Feature: domain Description: Integrase_H2C2 Location: 1440-1533 bp Feature: domain Description: Integrase_H2 C2 Location: 1440-1533 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG11/RVT-DGRs/RVT-UG26/RVT-UG7(RVT-UNC), Integrase_H2C2 (pfam17921)

Seq: CACRBJ010000143.1 (1645 bp)
Overview 1 RT 1: 2-1472 bp Neighborhood of RT #1 [2, 1472] RVT-UG11 Feature: gene Location: 2-910 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 527-734 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 527-73 4 bp Feature: gene Location: 963-1121 bp Feature: gene Location: 1224-1472 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG11

Seq: CACRBJ010000148.1 (1449 bp)
Overview 1 RT 1: 3-1005 bp Neighborhood of RT #1 [3, 1448] RVT-UG11 Peptidase_A17 Feature: gene Location: 3-395 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 147-375 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 14 7-375 bp Feature: gene Location: 636-1448 bp Feature: domain Description: Peptidase_A17 Location: 639-1005 bp Feature: domain Description: Peptidase_A17 Location: 639-1005 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG11, Peptidase_A17 (pfam05380)

Seq: CACRBJ010000126.1 (2068 bp)
Overview 1 RT 1: 219-1675 bp Neighborhood of RT #1 [219, 1947] RVT_N RVT-GII GIIM Feature: gene Location: 219-362 bp Feature: gene Location: 400-1947 bp Feature: domain Description: RVT_N Location: 451-688 bp Feature: domain Description: RVT_N Location: 45 1-688 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 739-1390 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 739-1390 bp Feature: domain Description: GIIM Note: maturase Location: 1441-1675 bp Feature: domain Description: GIIM Note: maturase Location: 1441-1675 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: CACRBJ010000001.1 (62858 bp)
Overview 1 RT 1: 33119-39025 bp Neighborhood of RT #1 [33119, 39381] Virulence_RhuM RVT-GII PRK07078 repA Feature: gene Location: 33119-34123 bp Feature: domain Description: Virulence_RhuM Location: 33308-34058 bp Feature: domain Description: Virulence_RhuM Location: 33308-34058 bp Feature: gene Location: 34335-34538 bp Feature: gene Location: 34709-36022 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34964-35654 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3496 4-356 54 bp Feature: gene Location: 35935-36207 bp Feature: gene Location: 37186-39381 bp Feature: domain Description: PRK07078 Location: 37249-38167 bp Feature: domain Description: PRK07078 Location: 37249-3816 7 bp Feature: domain Description: repA Location: 38266-39025 bp Feature: domain Description: repA Location: 3826 6 -39025 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Virulence_RhuM (pfam13310), RVT-GII, PRK07078 (hypothetical protein; Validated), repA