myRT

myRT report for GCA_902646885.1_WOLB1003

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Seq: CACRDU010000202.1 (2067 bp)
Overview 1 RT 1: 131-1793 bp Neighborhood of RT #1 [131, 1807] RVT-GII RuvC Feature: gene Location: 131-1444 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 386-1076 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 386-1 076 bp Feature: gene Location: 1568-1807 bp Feature: domain Description: RuvC Location: 1667-1793 bp Feature: domain Description: RuvC Location: 1 667-1 793 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, RuvC (pfam02075)

Seq: CACRDU010000143.1 (3128 bp)
Overview 1 RT 1: 16-3005 bp Neighborhood of RT #1 [16, 3005] RVT-GII Feature: gene Location: 16-297 bp Feature: gene Location: 521-805 bp Feature: gene Location: 1201-2505 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1456-2146 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1456-2 146 bp Feature: gene Location: 2490-3005 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: CACRDU010000264.1 (1378 bp)
Overview 1 RT 1: 115-1308 bp Neighborhood of RT #1 [115, 1343] RVT_N RVT-GII RVT-GII GIIM Feature: gene Location: 115-690 bp Feature: domain Description: RVT_N Location: 118-271 bp Feature: domain Description: RVT_N Location: 118-271 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 313-625 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 13 -625 bp Feature: gene Location: 759-1343 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 780-999 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 780-999 bp Feature: domain Description: GIIM Note: maturase Location: 1092-1308 bp Feature: domain Description: GIIM Note: maturase Location: 1092-13 08 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: CACRDU010000021.1 (9120 bp)
Overview 1 RT 1: 1016-5605 bp Neighborhood of RT #1 [1016, 5605] DDE_Tnp_1 RVT-GII Intron_maturas2 HNHc DDE_Tnp_1 Feature: gene Location: 1016-1183 bp Feature: gene Location: 1200-1637 bp Feature: domain Description: DDE_Tnp_1 Location: 1206-1395 bp Feature: domain Description: DDE_Tnp_1 Location: 1206-1395 bp Feature: gene Location: 1854-3647 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2121-2910 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2121-2910 bp Feature: domain Description: Intron_maturas2 Location: 3003-3264 bp Feature: domain Description: Intron_maturas2 Location: 3003-3264 bp Feature: domain Description: HNHc Note: nucleases Location: 3420-3600 bp Feature: domain Description: HNHc Note: nucleases Location: 34 20-3600 bp Feature: gene Location: 4263-4994 bp Feature: domain Description: DDE_Tnp_1 Location: 4278-4752 bp Feature: domain Description: DDE_Tnp_1 Location: 4 278-4 752 bp Feature: gene Location: 5015-5605 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: CACRDU010000004.1 (19087 bp)
Overview 1 RT 1: 7738-11023 bp Neighborhood of RT #1 [7738, 11023] pcrA RVT-GII Feature: gene Location: 7738-8067 bp Feature: gene Location: 8195-10111 bp Feature: domain Description: pcrA Location: 8207-10091 bp Feature: domain Description: pcrA Location: 8207-10091 bp Feature: gene Location: 10335-10478 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10338-10473 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10338-10473 bp Feature: gene Location: 10641-10862 bp Feature: gene Location: 10895-11023 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT pcrA (TIGR01073), RVT-GII

Seq: CACRDU010000186.1 (2310 bp)
Overview 1 RT 1: 1-1917 bp Neighborhood of RT #1 [1, 2189] RVT_N RVT-GII GIIM Feature: gene Location: 1-204 bp Feature: gene Location: 461-604 bp Feature: gene Location: 642-2189 bp Feature: domain Description: RVT_N Location: 693-930 bp Feature: domain Description: RVT_N Location: 6 93-930 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 981-1632 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 981-16 32 bp Feature: domain Description: GIIM Note: maturase Location: 1683-1917 bp Feature: domain Description: GIIM Note: maturase Location: 16 83-1917 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)