myRT

myRT report for GCA_902646925.1_WOLB1004

Download annotations/find similar RTs

Seq: CACRDW010000164.1 (2642 bp)
Overview 1 RT 1: 2-2450 bp Neighborhood of RT #1 [2, 2515] RVT-GII Virulence_RhuM Feature: gene Location: 2-925 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 257-875 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 257-875 bp Feature: gene Location: 1096-1299 bp Feature: gene Location: 1511-2515 bp Feature: domain Description: Virulence_RhuM Location: 1700-2450 bp Feature: domain Description: Virulence_RhuM Location: 1 700-2450 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Virulence_RhuM (pfam13310)

Seq: CACRDW010000082.1 (4776 bp)
Overview 1 RT 1: 1034-4533 bp Neighborhood of RT #1 [1034, 4775] DDE_Tnp_1 RVT-GII Intron_maturas2 HNHc DDE_Tnp_1 Feature: gene Location: 1034-1201 bp Feature: gene Location: 1218-1655 bp Feature: domain Description: DDE_Tnp_1 Location: 1224-1413 bp Feature: domain Description: DDE_Tnp_1 Location: 12 2 4-1413 bp Feature: gene Location: 1872-3665 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2139-2928 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 139-2 92 8 bp Feature: domain Description: Intron_maturas2 Location: 3021-3282 bp Feature: domain Description: Intron_maturas2 Location: 302 1-32 82 bp Feature: domain Description: HNHc Note: nucleases Location: 3438-3618 bp Feature: domain Description: HNHc Note: nucleases Location: 3438-3618 bp Feature: gene Location: 4281-4775 bp Feature: domain Description: DDE_Tnp_1 Location: 4311-4533 bp Feature: domain Description: DDE_Tnp_1 Location: 4311-4533 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: CACRDW010000183.1 (2425 bp)
Overview 1 RT 1: 123-1568 bp Neighborhood of RT #1 [123, 1927] RVT-GII Feature: gene Location: 123-638 bp Feature: gene Location: 623-1927 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 878-1568 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 878-1568 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: CACRDW010000162.1 (2654 bp)
Overview 1 RT 1: 2-2637 bp Neighborhood of RT #1 [2, 2651] RVT-GII GIIM HNHc RVT_N RVT-GII PDDEXK_2 Feature: gene Location: 2-220 bp Feature: gene Location: 247-1149 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 268-487 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 268-4 87 bp Feature: domain Description: GIIM Note: maturase Location: 580-796 bp Feature: domain Description: GIIM Note: maturase Location: 580-796 bp Feature: domain Description: HNHc Note: nucleases Location: 994-1135 bp Feature: domain Description: HNHc Note: nucleases Location: 994 -1135 bp Feature: gene Location: 1218-1994 bp Feature: domain Description: RVT_N Location: 1329-1575 bp Feature: domain Description: RVT_N Location: 1329-1575 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1617-1929 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1617-1929 bp Feature: gene Location: 2415-2651 bp Feature: domain Description: PDDEXK_2 Location: 2418-2637 bp Feature: domain Description: PDDEXK_2 Location: 24 18-2637 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HNHc (smart00507), RVT_N (pfam13655), PDDEXK_2 (pfam12784)

Seq: CACRDW010000068.1 (5180 bp)
Overview 1 RT 1: 1494-4878 bp Neighborhood of RT #1 [1494, 4878] RVT-GII pcrA Feature: gene Location: 1494-1622 bp Feature: gene Location: 1655-1876 bp Feature: gene Location: 2039-2182 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2042-2177 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2042-2177 bp Feature: gene Location: 2406-4322 bp Feature: domain Description: pcrA Location: 2418-4302 bp Feature: domain Description: pcrA Location: 2418-4302 bp Feature: gene Location: 4450-4878 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, pcrA (TIGR01073)