myRT

myRT report for GCA_902646975.1_WOLB1013

Download annotations/find similar RTs

Seq: CACREV010000332.1 (1370 bp)
Overview 1 RT 1: 1-1249 bp Neighborhood of RT #1 [1, 1275] RVT-GII GIIM HNHc Feature: gene Location: 1-1275 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-613 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-61 3 bp Feature: domain Description: GIIM Note: maturase Location: 706-922 bp Feature: domain Description: GIIM Note: maturase Location: 706-922 bp Feature: domain Description: HNHc Note: nucleases Location: 1108-1249 bp Feature: domain Description: HNHc Note: nucleases Location: 1 1 08-1 249 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: CACREV010000373.1 (1027 bp)
Overview 1 RT 1: 3-1020 bp Neighborhood of RT #1 [3, 1025] RVT-GII GIIM Feature: gene Location: 3-1025 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 84-735 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 84-735 bp Feature: domain Description: GIIM Note: maturase Location: 786-1020 bp Feature: domain Description: GIIM Note: maturase Location: 786-102 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: CACREV010000192.1 (4103 bp)
Overview 1 RT 1: 2-3152 bp Neighborhood of RT #1 [2, 3157] RVT-GII GIIM HNHc RVT_N RVT-GII PDDEXK_2 Dimer_Tnp_Tn5 Feature: gene Location: 2-220 bp Feature: gene Location: 247-1149 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 268-487 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 268-487 bp Feature: domain Description: GIIM Note: maturase Location: 580-796 bp Feature: domain Description: GIIM Note: maturase Location: 580-796 bp Feature: domain Description: HNHc Note: nucleases Location: 994-1135 bp Feature: domain Description: HNHc Note: nucleases Location: 994-113 5 bp Feature: gene Location: 1218-1994 bp Feature: domain Description: RVT_N Location: 1329-1575 bp Feature: domain Description: RVT_N Location: 13 29-1575 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1617-1929 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1617-1929 bp Feature: gene Location: 2415-2795 bp Feature: domain Description: PDDEXK_2 Location: 2493-2775 bp Feature: domain Description: PDDEXK_2 Location: 2493 -2775 bp Feature: gene Location: 2903-3157 bp Feature: domain Description: Dimer_Tnp_Tn5 Location: 2996-3152 bp Feature: domain Description: Dimer_Tnp_Tn5 Location: 2996-3 152 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HNHc (smart00507), RVT_N (pfam13655), PDDEXK_2 (pfam12784), Dimer_Tnp_Tn5 (pfam02281)

Seq: CACREV010000076.1 (10071 bp)
Overview 1 RT 1: 1242-4626 bp Neighborhood of RT #1 [1242, 4626] pcrA RVT-GII Feature: gene Location: 1242-1670 bp Feature: gene Location: 1798-3714 bp Feature: domain Description: pcrA Location: 1810-3694 bp Feature: domain Description: pcrA Location: 1810-3694 bp Feature: gene Location: 3938-4081 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3941-4076 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 394 1-4 076 bp Feature: gene Location: 4244-4465 bp Feature: gene Location: 4498-4626 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT pcrA (TIGR01073), RVT-GII

Seq: CACREV010000266.1 (2305 bp)
Overview 1 RT 1: 528-2196 bp Neighborhood of RT #1 [528, 2210] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 528-2210 bp Feature: domain Description: RVT_N Location: 558-804 bp Feature: domain Description: RVT_N Location: 5 5 8-804 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 846-1551 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 846-15 5 1 bp Feature: domain Description: GIIM Note: maturase Location: 1626-1857 bp Feature: domain Description: GIIM Note: maturase Location: 1626-185 7 bp Feature: domain Description: HNHc Note: nucleases Location: 2058-2196 bp Feature: domain Description: HNHc Note: nucleases Location: 205 8-2196 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: CACREV010000363.1 (1087 bp)
Overview 1 RT 1: 1-637 bp Neighborhood of RT #1 [1, 1005] RVT-GII Feature: gene Location: 1-1005 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-637 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-6 37 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: CACREV010000279.1 (2068 bp)
Overview 1 RT 1: 219-1840 bp Neighborhood of RT #1 [219, 1947] RVT_N RVT-GII YkfC Feature: gene Location: 219-362 bp Feature: gene Location: 400-1947 bp Feature: domain Description: RVT_N Location: 451-688 bp Feature: domain Description: RVT_N Location: 451-688 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 739-1390 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7 39-1390 bp Feature: domain Description: YkfC Location: 1390-1840 bp Feature: domain Description: YkfC Location: 1390-1840 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, YkfC (COG3344)