myRT

myRT report for GCA_902647285.1_WOLB1039

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Seq: CACRFD010000069.1 (3535 bp)
Overview 1 RT 1: 123-3527 bp Neighborhood of RT #1 [123, 3532] RVT-UNC RT_RNaseH Feature: gene Location: 123-1481 bp Feature: gene Location: 1598-3532 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 2732-2936 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 2732-2936 bp Feature: domain Description: RT_RNaseH Location: 3242-3527 bp Feature: domain Description: RT_RNaseH Location: 3242-3527 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG11/RVT-UG26/RVT-DGRs/RVT-UG28(RVT-UNC), RT_RNaseH (pfam17917)

Seq: CACRFD010000228.1 (1736 bp)
Overview 1 RT 1: 65-1720 bp Neighborhood of RT #1 [65, 1734] RVT-GII RVT_N RVT-GII PDDEXK_2 Feature: gene Location: 65-343 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 83-305 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 83-305 bp Feature: gene Location: 412-1188 bp Feature: domain Description: RVT_N Location: 523-769 bp Feature: domain Description: RVT_N Location: 52 3-769 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 811-1126 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 811-112 6 bp Feature: gene Location: 1609-1734 bp Feature: domain Description: PDDEXK_2 Location: 1615-1720 bp Feature: domain Description: PDDEXK_2 Location: 1615-172 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, RVT_N (pfam13655), PDDEXK_2 (pfam12784)

Seq: CACRFD010000271.1 (1525 bp)
Overview 1 RT 1: 112-1523 bp Neighborhood of RT #1 [112, 1522] RVT_N RVT-GII GIIM Feature: gene Location: 112-255 bp Feature: gene Location: 293-1522 bp Feature: domain Description: RVT_N Location: 344-581 bp Feature: domain Description: RVT_N Location: 3 44-581 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 632-1283 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63 2-1283 bp Feature: domain Description: GIIM Note: maturase Location: 1334-1523 bp Feature: domain Description: GIIM Note: maturase Location: 13 3 4-1523 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: CACRFD010000389.1 (1145 bp)
Overview 1 RT 1: 291-966 bp Neighborhood of RT #1 [291, 971] RVT-GII Feature: gene Location: 291-419 bp Feature: gene Location: 452-673 bp Feature: gene Location: 828-971 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 831-966 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 831-966 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: CACRFD010000189.1 (1918 bp)
Overview 1 RT 1: 111-1797 bp Neighborhood of RT #1 [111, 1797] RVT-GII group_II_RT_mat Feature: gene Location: 111-1100 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 117-732 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 117-732 bp Feature: gene Location: 1184-1423 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1271-1412 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1271-1412 bp Feature: gene Location: 1594-1797 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, group_II_RT_mat (TIGR04416)

Seq: CACRFD010000091.1 (3017 bp)
Overview 1 RT 1: 3-3016 bp Neighborhood of RT #1 [3, 3016] RVT-UG11 RNase_HI_RT_Ty3 Integrase_H2C2 rve Feature: gene Location: 3-2804 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 657-858 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 6 57-858 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 1176-1521 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 1176 -1521 bp Feature: domain Description: Integrase_H2C2 Location: 1923-2070 bp Feature: domain Description: Integrase_H2C2 Location: 1923-2070 bp Feature: domain Description: rve Location: 2124-2427 bp Feature: domain Description: rve Location: 2124-2427 bp Feature: gene Location: 2846-3016 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG11, RNase_HI_RT_Ty3 (cd09274), Integrase_H2C2 (pfam17921), rve (pfam00665)

Seq: CACRFD010000058.1 (3912 bp)
Overview 1 RT 1: 183-3911 bp Neighborhood of RT #1 [183, 3911] PDDEXK_2 RVT_N RVT-GII GIIM Feature: gene Location: 183-719 bp Feature: gene Location: 916-1650 bp Feature: domain Description: PDDEXK_2 Location: 1042-1507 bp Feature: domain Description: PDDEXK_2 Location: 1042-1507 bp Feature: gene Location: 1647-3194 bp Feature: domain Description: RVT_N Location: 1698-1941 bp Feature: domain Description: RVT_N Location: 1698-1941 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1986-2637 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1986-2637 bp Feature: domain Description: GIIM Note: maturase Location: 2688-2922 bp Feature: domain Description: GIIM Note: maturase Location: 2688-2922 bp Feature: gene Location: 3232-3375 bp Feature: gene Location: 3630-3911 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PDDEXK_2 (pfam12784), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)