myRT

myRT report for GCA_902647925.1_WOLB1100

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Seq: CACRHP010000002.1 (24363 bp)
Overview 1 RT 1: 623-6822 bp Neighborhood of RT #1 [623, 6887] PRK07078 repA RVT-GII Virulence_RhuM Feature: gene Location: 623-2818 bp Feature: domain Description: PRK07078 Location: 686-1604 bp Feature: domain Description: PRK07078 Location: 686-1 604 bp Feature: domain Description: repA Location: 1703-2462 bp Feature: domain Description: repA Location: 1 703-2462 bp Feature: gene Location: 3984-5297 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4239-4929 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4239-4929 bp Feature: gene Location: 5468-5671 bp Feature: gene Location: 5883-6887 bp Feature: domain Description: Virulence_RhuM Location: 6072-6822 bp Feature: domain Description: Virulence_RhuM Location: 6072-6822 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK07078 (hypothetical protein; Validated), repA, RVT-GII, Virulence_RhuM (pfam13310)

Seq: CACRHP010000209.1 (1874 bp)
Overview 1 RT 1: 1-1872 bp Neighborhood of RT #1 [1, 1871] RVT_N RVT-GII GIIM Feature: gene Location: 1-204 bp Feature: gene Location: 461-604 bp Feature: gene Location: 642-1871 bp Feature: domain Description: RVT_N Location: 693-930 bp Feature: domain Description: RVT_N Location: 693-930 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 981-1632 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 981-1632 bp Feature: domain Description: GIIM Note: maturase Location: 1683-1872 bp Feature: domain Description: GIIM Note: maturase Location: 1683-1872 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: CACRHP010000175.1 (2183 bp)
Overview 1 RT 1: 1-1914 bp Neighborhood of RT #1 [1, 2180] RVT_N RVT-GII GIIM Feature: gene Location: 1-201 bp Feature: gene Location: 458-601 bp Feature: gene Location: 639-2180 bp Feature: domain Description: RVT_N Location: 690-933 bp Feature: domain Description: RVT_N Location: 690-93 3 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 978-1629 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 978-1629 bp Feature: domain Description: GIIM Note: maturase Location: 1680-1914 bp Feature: domain Description: GIIM Note: maturase Location: 1680-1914 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: CACRHP010000187.1 (2073 bp)
Overview 1 RT 1: 2-2069 bp Neighborhood of RT #1 [2, 2071] RNase_HI_RT_Ty3 Integrase_H2C2 rve RVT-UG11 AtoC RT_RNaseH_2 Feature: gene Location: 2-1099 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 5-221 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 5-221 bp Feature: domain Description: Integrase_H2C2 Location: 617-761 bp Feature: domain Description: Integrase_H2C2 Location: 617-761 bp Feature: domain Description: rve Location: 809-1100 bp Feature: domain Description: rve Location: 809-1100 bp Feature: gene Location: 1184-2071 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 1535-1676 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 1535-1676 bp Feature: domain Description: AtoC Location: 1721-1808 bp Feature: domain Description: AtoC Location: 1721-1808 bp Feature: domain Description: RT_RNaseH_2 Location: 1946-2069 bp Feature: domain Description: RT_RNaseH_2 Location: 194 6-2069 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RNase_HI_RT_Ty3 (cd09274), Integrase_H2C2 (pfam17921), rve (pfam00665), RVT-UG11, AtoC (COG2204), RT_RNaseH_2 (pfam17919)