myRT

myRT report for GCA_902651655.1_S784_spades

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Seq: CACRSE010000011.1 (65053 bp)
Overview 1 RT 1: 28701-32706 bp Neighborhood of RT #1 [28701, 32708] TrmN6 GIY-YIG_UPF0213 RVT-GII group_II_RT_mat COG4708 Feature: gene Location: 28701-29732 bp Feature: domain Description: TrmN6 Location: 28731-29457 bp Feature: domain Description: TrmN6 Location: 28731 -29457 bp Feature: domain Description: GIY-YIG_UPF0213 Location: 29487-29682 bp Feature: domain Description: GIY-YIG_UPF021 3 Location: 29487-29682 bp Feature: gene Location: 29768-29899 bp Feature: gene Location: 30400-31098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30403-30961 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30403-30961 bp Feature: gene Location: 31107-31460 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 31248-31452 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 31 248-31 452 bp Feature: gene Location: 32082-32708 bp Feature: domain Description: COG4708 Location: 32187-32706 bp Feature: domain Description: COG4708 Location: 321 87-32706 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TrmN6 (COG4123), GIY-YIG_UPF0213 (cd10456), RVT-GII, group_II_RT_mat (TIGR04416), COG4708 (Uncharacterized membrane protein )

Seq: CACRSE010000014.1 (50962 bp)
Overview 1 RT 1: 32281-35779 bp Neighborhood of RT #1 [32281, 35799] PRK00153 RVT-GII BaeS OmpR Feature: gene Location: 32281-32580 bp Feature: domain Description: PRK00153 Location: 32284-32572 bp Feature: domain Description: PRK00153 Location: 32 2 84-32 572 bp Feature: gene Location: 33275-33403 bp Feature: gene Location: 33422-33586 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33428-33563 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3342 8-33563 bp Feature: gene Location: 33741-34955 bp Feature: domain Description: BaeS Location: 33969-34842 bp Feature: domain Description: BaeS Location: 33969-34842 bp Feature: gene Location: 35134-35799 bp Feature: domain Description: OmpR Location: 35143-35779 bp Feature: domain Description: OmpR Location: 35143-35779 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK00153 (YbaB/EbfC family nucleoid-associated protein), RVT-GII, BaeS (COG0642), OmpR (COG0745)

Seq: CACRSE010000065.1 (545 bp)
Overview 1 RT 1: 214-538 bp Neighborhood of RT #1 [214, 543] RVT-CRISPR-like Feature: gene Location: 214-543 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 328-538 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 3 28-53 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR