myRT

myRT report for GCA_902706035.1_n18069v0.1

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Seq: CACSJA010000047.1 (32283 bp)
Overview 1 RT 1: 14492-17726 bp Neighborhood of RT #1 [14492, 17866] DUF1566 Avd_like RVT-DGRs Methyltransf_11 Feature: gene Location: 14492-14911 bp Feature: domain Description: DUF1566 Location: 14669-14888 bp Feature: domain Description: DUF1 566 Location: 1 4669-1 4888 bp Feature: gene Location: 14942-15400 bp Feature: domain Description: Avd_like Location: 14969-15275 bp Feature: domain Description: Avd_like Location: 1 4969-1 5275 bp Feature: gene Location: 15559-16665 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 15751-16429 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 5751 -1 6429 bp Feature: gene Location: 16711-17205 bp Feature: gene Location: 17345-17866 bp Feature: domain Description: Methyltransf_11 Location: 17657-17726 bp Feature: domain Description: Methyltransf_1 1 Location: 1 7657-1 7726 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1566 (pfam07603), Avd_like (cd16376), RVT-DGRs, Methyltransf_11 (pfam08241)

Seq: CACSJA010000027.1 (73344 bp)
Overview 1 RT 1: 68905-72489 bp Neighborhood of RT #1 [68905, 72647] TsaA MopI RVT-GII GIIM Feature: gene Location: 68905-71100 bp Feature: domain Description: TsaA Location: 70630-71059 bp Feature: domain Description: TsaA Location: 70630-71059 bp Feature: gene Location: 71114-71326 bp Feature: domain Description: MopI Location: 71117-71321 bp Feature: domain Description: MopI Location: 71117-7132 1 bp Feature: gene Location: 71448-72647 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 71613-72225 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 71613-72 2 2 5 bp Feature: domain Description: GIIM Note: maturase Location: 72285-72489 bp Feature: domain Description: GIIM Note: maturase Location: 72 2 85-72 489 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TsaA (COG1720), MopI (COG3585), RVT-GII, GIIM (pfam08388)

Seq: CACSJA010000068.1 (4692 bp)
Overview 1 RT 1: 365-4529 bp Neighborhood of RT #1 [365, 4529] DDE_Tnp_IS66 DDE_Tnp_IS66_C RVT-UG25 Feature: gene Location: 365-709 bp Feature: gene Location: 785-1270 bp Feature: domain Description: DDE_Tnp_IS66 Location: 788-1109 bp Feature: domain Description: DDE_Tnp_IS66 Location: 788-1109 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1130-1241 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 113 0-1241 bp Feature: gene Location: 1625-3346 bp Feature: RT Description: RVT-UG25 Note: UG25 RT Location: 2027-2453 bp Feature: RT Description: RVT-UG25 Note: UG25 RT Location: 2027-2453 bp Feature: gene Location: 3343-4311 bp Feature: gene Location: 4389-4529 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), RVT-UG25

Seq: CACSJA010000085.1 (1456 bp)
Overview 1 RT 1: 3-1254 bp Neighborhood of RT #1 [3, 1346] RVT-GII GIIM Feature: gene Location: 3-1346 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 372-987 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 372-987 bp Feature: domain Description: GIIM Note: maturase Location: 1044-1254 bp Feature: domain Description: GIIM Note: maturase Location: 104 4 -1254 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)