myRT

myRT report for GCA_902706235.1_n18056v0.1

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Seq: CACSJR010000002.1 (424078 bp)
Overview 1 RT 1: 80540-84829 bp Neighborhood of RT #1 [80540, 84885] PRK09692 RVT-UG15 Psu PRK09678 Feature: gene Location: 80540-80689 bp Feature: gene Location: 80753-81919 bp Feature: domain Description: PRK09692 Location: 80759-81905 bp Feature: domain Description: PRK09692 Location: 80759-81 905 bp Feature: gene Location: 81936-83552 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 82347-82770 bp Feature: RT Description: RVT-UG1 5 Note: UG1 5 RT Location: 82347-82770 bp Feature: gene Location: 84057-84623 bp Feature: domain Description: Psu Location: 84075-84618 bp Feature: domain Description: Psu Location: 84075-8461 8 bp Feature: gene Location: 84640-84885 bp Feature: domain Description: PRK09678 Location: 84643-84829 bp Feature: domain Description: PRK09678 Location: 84643-84829 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), RVT-UG15, Psu (pfam07455), PRK09678 (DNA-binding transcriptional regulator; Provisional)

Seq: CACSJR010000035.1 (13845 bp)
Overview 1 RT 1: 3990-6759 bp 2 RT 2: 8859-12821 bp Neighborhood of RT #1 [3990, 6800] DDE_Tnp_IS66 RVT-GII DDE_Tnp_IS66 Neighborhood of RT #2 [8859, 12901] RVT-GII GIIM Tra5 Phage_integrase Feature: gene Location: 3990-4292 bp Feature: domain Description: DDE_Tnp_IS66 Location: 4038-4272 bp Feature: domain Description: DDE_Tnp_IS66 Location: 4038-42 72 bp Feature: gene Location: 4301-4438 bp Feature: gene Location: 4766-5713 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4979-5636 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4979-5636 bp Feature: gene Location: 5870-6031 bp Feature: gene Location: 6126-6800 bp Feature: domain Description: DDE_Tnp_IS66 Location: 6129-6759 bp Feature: domain Description: DDE_Tnp_IS66 Location: 612 9-6759 bp Feature: gene Location: 8859-9533 bp Feature: gene Location: 9582-9869 bp Feature: gene Location: 10164-11687 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10437-11169 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10437-11169 bp Feature: domain Description: GIIM Note: maturase Location: 11241-11442 bp Feature: domain Description: GIIM Note: maturase Location: 112 41-11442 bp Feature: gene Location: 11798-12229 bp Feature: domain Description: Tra5 Location: 11804-12224 bp Feature: domain Description: Tra5 Location: 11804-12 2 2 4 bp Feature: gene Location: 12260-12901 bp Feature: domain Description: Phage_integrase Location: 12290-12821 bp Feature: domain Description: Phage_integrase Location: 12 2 90-12 82 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66 (pfam03050), RVT-GII, GIIM (pfam08388), Tra5 (COG2801), Phage_integrase (pfam00589)