myRT

myRT report for GCA_902713635.1_WoCaobscurior_wCobs-BR2009-alpha_v1.0

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Seq: CACTIU010000004.1 (35528 bp)
Overview 1 RT 1: 19299-22583 bp Neighborhood of RT #1 [19299, 22583] pcrA RVT-GII Feature: gene Location: 19299-19628 bp Feature: gene Location: 19756-21672 bp Feature: domain Description: pcrA Location: 19768-21652 bp Feature: domain Description: pcrA Location: 1 9768-21 652 bp Feature: gene Location: 21827-22039 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21830-22010 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 830-2201 0 bp Feature: gene Location: 22291-22422 bp Feature: gene Location: 22455-22583 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT pcrA (TIGR01073), RVT-GII

Seq: CACTIU010000105.1 (1907 bp)
Overview 1 RT 1: 58-1514 bp Neighborhood of RT #1 [58, 1786] RVT_N RVT-GII GIIM Feature: gene Location: 58-201 bp Feature: gene Location: 239-1786 bp Feature: domain Description: RVT_N Location: 290-527 bp Feature: domain Description: RVT_N Location: 2 90-52 7 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 578-1229 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 578-12 2 9 bp Feature: domain Description: GIIM Note: maturase Location: 1280-1514 bp Feature: domain Description: GIIM Note: maturase Location: 12 80-1514 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: CACTIU010000014.1 (18766 bp)
Overview 1 RT 1: 5292-9383 bp Neighborhood of RT #1 [5292, 9383] PDDEXK_2 RVT_N RVT-GII RVT-GII GIIM T_den_put_tspse Feature: gene Location: 5292-5735 bp Feature: domain Description: PDDEXK_2 Location: 5376-5676 bp Feature: domain Description: PDDEXK_2 Location: 53 76-5676 bp Feature: gene Location: 6183-6503 bp Feature: domain Description: RVT_N Location: 6225-6465 bp Feature: domain Description: RVT_N Location: 6225-6465 bp Feature: gene Location: 6579-6875 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6582-6804 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6582-6804 bp Feature: gene Location: 6944-7603 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6965-7184 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6965-7184 bp Feature: domain Description: GIIM Note: maturase Location: 7277-7493 bp Feature: domain Description: GIIM Note: maturase Location: 7277-7493 bp Feature: gene Location: 7835-8245 bp Feature: domain Description: T_den_put_tspse Location: 7940-8225 bp Feature: domain Description: T_den_put_tspse Location: 7940-8225 bp Feature: gene Location: 8460-9383 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PDDEXK_2 (pfam12784), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), T_den_put_tspse (TIGR01784)