myRT

myRT report for GCA_902726585.1_LCC6

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Seq: CACVAH010000011.1 (57613 bp)
Overview 1 RT 1: 51759-56002 bp Neighborhood of RT #1 [51759, 56002] RVT-GII GIIM Feature: gene Location: 51759-52298 bp Feature: gene Location: 52334-53017 bp Feature: gene Location: 53533-54912 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53851-54469 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53851 -54469 bp Feature: domain Description: GIIM Note: maturase Location: 54517-54730 bp Feature: domain Description: GIIM Note: maturase Location: 5451 7-54730 bp Feature: gene Location: 55001-55234 bp Feature: gene Location: 55304-56002 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: CACVAH010000019.1 (229699 bp)
Overview 1 RT 1: 155093-166710 bp Neighborhood of RT #1 [155093, 166710] PhaF ZnMc choice_anch_D Por_Secre_tail RVT-GII RVT-GII RVT-GII PilF PilF PulD Feature: gene Location: 155093-155407 bp Feature: domain Description: PhaF Location: 155096-155384 bp Feature: domain Description: PhaF Location: 155096-155384 bp Feature: gene Location: 155661-160859 bp Feature: domain Description: ZnMc Location: 156612-156894 bp Feature: domain Description: ZnMc Location: 156612 -156894 bp Feature: domain Description: choice_anch_D Location: 157452-157749 bp Feature: domain Description: choice_anch_D Location: 157452 -157749 bp Feature: domain Description: Por_Secre_tail Location: 159519-159663 bp Feature: domain Description: Por_Secre_tail Location: 159519-159663 bp Feature: gene Location: 161787-162146 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 161829-161982 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16182 9-161982 bp Feature: gene Location: 162170-162382 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 162179-162302 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 162 179-162 302 bp Feature: gene Location: 162397-162558 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 162403-162517 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 162 403-162 517 bp Feature: gene Location: 163029-165767 bp Feature: domain Description: PilF Location: 163131-163341 bp Feature: domain Description: PilF Location: 163131-163341 bp Feature: domain Description: PilF Location: 163803-163974 bp Feature: domain Description: PilF Location: 163803-163974 bp Feature: domain Description: PulD Location: 164598-165666 bp Feature: domain Description: PulD Location: 164598-165666 bp Feature: gene Location: 165796-166710 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PhaF (COG3937), ZnMc (smart00235), choice_anch_D (NF012200), Por_Secre_tail (TIGR04183), RVT-GII, PilF (COG3063), PulD (COG1450)