myRT

myRT report for GCA_902726595.1_LCC10

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Seq: CACVAI010000026.1 (93385 bp)
Overview 1 RT 1: 37758-49354 bp Neighborhood of RT #1 [37758, 49377] PilF PilF PulD RVT-GII RVT-GII ZnMc choice_anch_D Por_Secre_tail PhaF Feature: gene Location: 37758-38672 bp Feature: gene Location: 38701-41439 bp Feature: domain Description: PilF Location: 38803-39013 bp Feature: domain Description: PilF Location: 38803-3901 3 bp Feature: domain Description: PilF Location: 39478-39646 bp Feature: domain Description: PilF Location: 39478-39646 bp Feature: domain Description: PulD Location: 40270-41338 bp Feature: domain Description: PulD Location: 40270-41 338 bp Feature: gene Location: 41910-42299 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41916-42219 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 91 6-4221 9 bp Feature: gene Location: 42323-42634 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42365-42518 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42365-4251 8 bp Feature: gene Location: 43611-48809 bp Feature: domain Description: ZnMc Location: 44562-44844 bp Feature: domain Description: ZnMc Location: 44562-44844 bp Feature: domain Description: choice_anch_D Location: 45402-45699 bp Feature: domain Description: choice_anch_D Location: 45402-45699 bp Feature: domain Description: Por_Secre_tail Location: 47469-47613 bp Feature: domain Description: Por_Secre_tail Location: 47469-4761 3 bp Feature: gene Location: 49063-49377 bp Feature: domain Description: PhaF Location: 49066-49354 bp Feature: domain Description: PhaF Location: 49066-49354 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PilF (COG3063), PulD (COG1450), RVT-GII, ZnMc (smart00235), choice_anch_D (NF012200), Por_Secre_tail (TIGR04183), PhaF (COG3937)

Seq: CACVAI010000077.1 (1779 bp)
Overview 1 RT 1: 1-1651 bp Neighborhood of RT #1 [1, 1776] RVT-GII GIIM Feature: gene Location: 1-381 bp Feature: gene Location: 454-1776 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 772-1390 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 772 -1390 bp Feature: domain Description: GIIM Note: maturase Location: 1438-1651 bp Feature: domain Description: GIIM Note: maturase Location: 1438-1651 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: CACVAI010000031.1 (57723 bp)
Overview 1 RT 1: 6121-9052 bp Neighborhood of RT #1 [6121, 9052] RVT-GII GIIM Feature: gene Location: 6121-6372 bp Feature: gene Location: 6400-6702 bp Feature: gene Location: 7051-8247 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7195-7861 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7195-7861 bp Feature: domain Description: GIIM Note: maturase Location: 7945-8146 bp Feature: domain Description: GIIM Note: maturase Location: 7945-8146 bp Feature: gene Location: 8350-8742 bp Feature: gene Location: 8834-9052 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)