myRT

myRT report for GCA_902727915.1_HLG_WM_MAG_05

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Seq: CACVAU010000045.1 (29947 bp)
Overview 1 RT 1: 22923-29249 bp Neighborhood of RT #1 [22923, 29356] RVT-CRISPR Cas1_I-II-III Cas2_I_II_III Cas_DxTHG Feature: gene Location: 22923-23336 bp Feature: gene Location: 24858-25127 bp Feature: gene Location: 25721-27925 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 25901-26492 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 25901 -26492 bp Feature: domain Description: Cas1_I-II-III Location: 26954-27887 bp Feature: domain Description: Cas1 _I-II-III Location: 26954-27887 bp Feature: gene Location: 27915-28193 bp Feature: domain Description: Cas2_I_II_III Location: 27924-28125 bp Feature: domain Description: Cas2_I_II_III Location: 27924-281 25 bp Feature: gene Location: 28199-29356 bp Feature: domain Description: Cas_DxTHG Location: 28238-29249 bp Feature: domain Description: Cas_DxTHG Location: 28238-29249 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, Cas1_I-II-III (cl00656), Cas2_I_II_III (cl11442), Cas_DxTHG (pfam09455)

Seq: CACVAU010000017.1 (41232 bp)
Overview 1 RT 1: 2-7438 bp Neighborhood of RT #1 [2, 8178] WGR_DNA_ligase RVT-Retrons degP_htrA_DO T3SC_YbjN-like_1 T3SC_YbjN-like_1 Feature: gene Location: 2-697 bp Feature: gene Location: 697-3888 bp Feature: domain Description: WGR_DNA_ligase Location: 712-937 bp Feature: domain Description: WGR_DNA_ligase Location: 712 -937 bp Feature: gene Location: 3901-5454 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4423-5029 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 442 3-502 9 bp Feature: gene Location: 5876-6946 bp Feature: domain Description: degP_htrA_DO Location: 5918-6374 bp Feature: domain Description: degP_htrA_DO Location: 5918-6374 bp Feature: domain Description: T3SC_YbjN-like_1 Location: 6545-6833 bp Feature: domain Description: T3SC_YbjN-like_1 Location: 6545-6833 bp Feature: gene Location: 6958-8178 bp Feature: domain Description: T3SC_YbjN-like_1 Location: 7159-7438 bp Feature: domain Description: T3SC_YbjN-like_1 Location: 7159-7438 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT WGR_DNA_ligase (cd07998), RVT-Retrons, degP_htrA_DO (TIGR02037), T3SC_YbjN-like_1 (cd17036)