myRT

myRT report for GCA_902727935.1_HLG_WM_MAG_04

Download annotations/find similar RTs

Seq: CACVAX010000044.1 (74415 bp)
Overview 1 RT 1: 69-1885 bp Neighborhood of RT #1 [69, 1944] RVT-DGRs DUF1566 fliH Feature: gene Location: 69-953 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 129-717 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 29-71 7 bp Feature: gene Location: 916-1350 bp Feature: domain Description: DUF1566 Location: 991-1339 bp Feature: domain Description: DUF1 566 Location: 991 -1 339 bp Feature: gene Location: 1513-1944 bp Feature: domain Description: fliH Location: 1642-1885 bp Feature: domain Description: fliH Location: 1 642-1 885 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, DUF1566 (pfam07603), fliH (PRK13386)

Seq: CACVAX010000056.1 (60023 bp)
Overview 1 RT 1: 26119-34207 bp Neighborhood of RT #1 [26119, 34207] WGR_DNA_ligase RVT-Retrons Fur Feature: gene Location: 26119-27759 bp Feature: gene Location: 27759-30824 bp Feature: domain Description: WGR_DNA_ligase Location: 27774-27999 bp Feature: domain Description: WGR_DNA_ligase Location: 2 7774-2 7999 bp Feature: gene Location: 30836-32398 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 31352-31952 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 31352 -31952 bp Feature: gene Location: 32786-33148 bp Feature: domain Description: Fur Location: 32792-33143 bp Feature: domain Description: Fur Location: 32 792 -33143 bp Feature: gene Location: 33251-34207 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT WGR_DNA_ligase (cd07998), RVT-Retrons, Fur (COG0735)

Seq: CACVAX010000043.1 (78625 bp)
Overview 1 RT 1: 47013-52018 bp Neighborhood of RT #1 [47013, 52092] Cas2_I_II_III RVT-CRISPR Cas1_I-II-III Cmr6_III-B Cas_Cmr5 Feature: gene Location: 47013-47447 bp Feature: gene Location: 48171-48455 bp Feature: domain Description: Cas2_I_II_III Location: 48183-48417 bp Feature: domain Description: Cas2_I_II_III Location: 48183 -48417 bp Feature: gene Location: 48455-50692 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 48662-49265 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 48662-49265 bp Feature: domain Description: Cas1_I-II-III Location: 49730-50657 bp Feature: domain Description: Cas1_I-II-III Location: 4973 0-50657 bp Feature: gene Location: 50693-51742 bp Feature: domain Description: Cmr6_III-B Location: 50810-51440 bp Feature: domain Description: Cmr6_III-B Location: 50810-51440 bp Feature: gene Location: 51751-52092 bp Feature: domain Description: Cas_Cmr5 Location: 51796-52018 bp Feature: domain Description: Cas_Cmr5 Location: 51796-52018 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas2_I_II_III (cl11442), RVT-CRISPR, Cas1_I-II-III (cl00656), Cmr6_III-B (cd09661), Cas_Cmr5 (pfam09701)