myRT

myRT report for GCA_902728225.1_LCC11

Download annotations/find similar RTs

Seq: CACVBN010000001.1 (214418 bp)
Overview 1 RT 1: 165041-176660 bp Neighborhood of RT #1 [165041, 176660] PhaF ZnMc choice_anch_D Por_Secre_tail RVT-GII RVT-GII PilF PilF PulD Feature: gene Location: 165041-165355 bp Feature: domain Description: PhaF Location: 165044-165332 bp Feature: domain Description: PhaF Location: 1 65044-1 65332 bp Feature: gene Location: 165609-170807 bp Feature: domain Description: ZnMc Location: 166560-166842 bp Feature: domain Description: ZnMc Location: 1 66560-1 66842 bp Feature: domain Description: choice_anch_D Location: 167400-167697 bp Feature: domain Description: choice_anch_D Location: 1 67400-1 67697 bp Feature: domain Description: Por_Secre_tail Location: 169467-169611 bp Feature: domain Description: Por_Secre_tail Location: 1 69467-1 6961 1 bp Feature: gene Location: 171784-172095 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 171826-171979 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 71 826-1 71 979 bp Feature: gene Location: 172119-172508 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 172125-172428 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 721 25-1 72428 bp Feature: gene Location: 172979-175717 bp Feature: domain Description: PilF Location: 173081-173291 bp Feature: domain Description: PilF Location: 1 73081 -1 73291 bp Feature: domain Description: PilF Location: 173756-173924 bp Feature: domain Description: PilF Location: 1 73756-1 73924 bp Feature: domain Description: PulD Location: 174548-175616 bp Feature: domain Description: PulD Location: 1 74548-1 7561 6 bp Feature: gene Location: 175746-176660 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PhaF (COG3937), ZnMc (smart00235), choice_anch_D (NF012200), Por_Secre_tail (TIGR04183), RVT-GII, PilF (COG3063), PulD (COG1450)

Seq: CACVBN010000065.1 (1779 bp)
Overview 1 RT 1: 1-1651 bp Neighborhood of RT #1 [1, 1776] RVT-GII GIIM Feature: gene Location: 1-381 bp Feature: gene Location: 454-1776 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 772-1390 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 772 -1390 bp Feature: domain Description: GIIM Note: maturase Location: 1438-1651 bp Feature: domain Description: GIIM Note: maturase Location: 1438-1651 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: CACVBN010000020.1 (139101 bp)
Overview 1 RT 1: 44253-47184 bp Neighborhood of RT #1 [44253, 47184] RVT-GII GIIM Feature: gene Location: 44253-44504 bp Feature: gene Location: 44532-44834 bp Feature: gene Location: 45183-46379 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45327-45993 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 453 27-45993 bp Feature: domain Description: GIIM Note: maturase Location: 46077-46278 bp Feature: domain Description: GIIM Note: maturase Location: 46077-46278 bp Feature: gene Location: 46482-46874 bp Feature: gene Location: 46966-47184 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)