myRT

myRT report for GCA_902729335.1_S607785_spades

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Seq: CACVCA010000007.1 (59154 bp)
Overview 1 RT 1: 16938-22406 bp Neighborhood of RT #1 [16938, 22406] PlsC TrmN6 GIY-YIG_UPF0213 RVT-GII RVT-GII COG4708 Feature: gene Location: 16938-17678 bp Feature: domain Description: PlsC Location: 16941-17529 bp Feature: domain Description: PlsC Location: 1 6941 -1 7529 bp Feature: gene Location: 17763-18794 bp Feature: domain Description: TrmN6 Location: 17793-18519 bp Feature: domain Description: TrmN6 Location: 1 7793-1 851 9 bp Feature: domain Description: GIY-YIG_UPF0213 Location: 18549-18744 bp Feature: domain Description: GIY-YIG_UPF021 3 Location: 1 8549-1 8744 bp Feature: gene Location: 19467-20018 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19470-19881 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 9470-1 9881 bp Feature: gene Location: 20088-20423 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20292-20421 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20292-20421 bp Feature: gene Location: 21150-21776 bp Feature: domain Description: COG4708 Location: 21255-21774 bp Feature: domain Description: COG4708 Location: 21 255-21 774 bp Feature: gene Location: 21837-22406 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PlsC (smart00563), TrmN6 (COG4123), GIY-YIG_UPF0213 (cd10456), RVT-GII, COG4708 (Uncharacterized membrane protein )

Seq: CACVCA010000014.1 (45250 bp)
Overview 1 RT 1: 9740-13624 bp Neighborhood of RT #1 [9740, 14019] OmpR BaeS RVT-GII PRK00153 HTH_TipAL-Mta Feature: gene Location: 9740-10405 bp Feature: domain Description: OmpR Location: 9749-10385 bp Feature: domain Description: OmpR Location: 9749-10385 bp Feature: gene Location: 10584-11798 bp Feature: domain Description: BaeS Location: 10812-11685 bp Feature: domain Description: BaeS Location: 10812 -11685 bp Feature: gene Location: 11953-12117 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11959-12094 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11959-12 094 bp Feature: gene Location: 12959-13258 bp Feature: domain Description: PRK00153 Location: 12962-13250 bp Feature: domain Description: PRK00153 Location: 12 962 -132 50 bp Feature: gene Location: 13297-14019 bp Feature: domain Description: HTH_TipAL-Mta Location: 13309-13624 bp Feature: domain Description: HTH_TipAL-Mta Location: 13309-1362 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT OmpR (COG0745), BaeS (COG0642), RVT-GII, PRK00153 (YbaB/EbfC family nucleoid-associated protein), HTH_TipAL-Mta (cd01106)