myRT

myRT report for GCA_902729355.1_S6133_spades

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Seq: CACVCC010000022.1 (38992 bp)
Overview 1 RT 1: 25819-29316 bp Neighborhood of RT #1 [25819, 29336] PRK00153 RVT-GII BaeS OmpR Feature: gene Location: 25819-26118 bp Feature: domain Description: PRK00153 Location: 25822-26110 bp Feature: domain Description: PRK001 53 Location: 25822-261 1 0 bp Feature: gene Location: 26812-26940 bp Feature: gene Location: 26959-27123 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26965-27097 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26965-27097 bp Feature: gene Location: 27278-28492 bp Feature: domain Description: BaeS Location: 27506-28379 bp Feature: domain Description: BaeS Location: 27506-28379 bp Feature: gene Location: 28671-29336 bp Feature: domain Description: OmpR Location: 28680-29316 bp Feature: domain Description: OmpR Location: 28680-2931 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK00153 (YbaB/EbfC family nucleoid-associated protein), RVT-GII, BaeS (COG0642), OmpR (COG0745)

Seq: CACVCC010000005.1 (107659 bp)
Overview 1 RT 1: 95428-103844 bp Neighborhood of RT #1 [95428, 103855] AAA_18 valS RVT-UG7 COG3886 SSL2 DUF3427 MutT_pyrophosphohydrolase Feature: gene Location: 95428-95991 bp Feature: domain Description: AAA_18 Location: 95437-95809 bp Feature: domain Description: AAA_18 Location: 95437-95809 bp Feature: gene Location: 96004-98655 bp Feature: domain Description: valS Location: 96010-98641 bp Feature: domain Description: valS Location: 96010-98641 bp Feature: gene Location: 98823-100499 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 99303-99711 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 99303-99711 bp Feature: gene Location: 100593-103448 bp Feature: domain Description: COG3886 Location: 100602-101181 bp Feature: domain Description: COG3886 Location: 100602 -101181 bp Feature: domain Description: SSL2 Location: 101229-102516 bp Feature: domain Description: SSL2 Location: 1012 2 9-102 516 bp Feature: domain Description: DUF3427 Location: 102645-103440 bp Feature: domain Description: DUF342 7 Location: 102 645-103440 bp Feature: gene Location: 103463-103855 bp Feature: domain Description: MutT_pyrophosphohydrolase Location: 103481-103844 bp Feature: domain Description: MutT_pyrophosphohydrolase Location: 103481-103844 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_18 (pfam13238), valS (TIGR00422), RVT-UG7, COG3886 (HKD family nuclease ), SSL2 (COG1061), DUF3427 (pfam11907), MutT_pyrophosphohydrolase (cd03425)

Seq: CACVCC010000011.1 (72499 bp)
Overview 1 RT 1: 40615-45449 bp Neighborhood of RT #1 [40615, 45451] PlsC TrmN6 GIY-YIG_UPF0213 RVT-GII group_II_RT_mat COG4708 Feature: gene Location: 40615-41355 bp Feature: domain Description: PlsC Location: 40618-41206 bp Feature: domain Description: PlsC Location: 40618-41206 bp Feature: gene Location: 41440-42471 bp Feature: domain Description: TrmN6 Location: 41470-42196 bp Feature: domain Description: TrmN6 Location: 41470-42196 bp Feature: domain Description: GIY-YIG_UPF0213 Location: 42226-42421 bp Feature: domain Description: GIY-YIG_UPF0213 Location: 42226-42421 bp Feature: gene Location: 43197-43841 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43200-43758 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43 200-43 758 bp Feature: gene Location: 43850-44098 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 43886-44090 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 43 886-44090 bp Feature: gene Location: 44825-45451 bp Feature: domain Description: COG4708 Location: 44930-45449 bp Feature: domain Description: COG4708 Location: 4493 0-45449 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PlsC (smart00563), TrmN6 (COG4123), GIY-YIG_UPF0213 (cd10456), RVT-GII, group_II_RT_mat (TIGR04416), COG4708 (Uncharacterized membrane protein )