myRT

myRT report for GCA_902749685.1_Delta1b_OalgB6SA

Download annotations/find similar RTs

Seq: CACVKW010000599.1 (12825 bp)
Overview 1 RT 1: 2396-5513 bp Neighborhood of RT #1 [2396, 5513] Acetyltransf_7 VanY RVT_N RVT-GII GIIM Feature: gene Location: 2396-2584 bp Feature: domain Description: Acetyltransf_7 Location: 2402-2543 bp Feature: domain Description: Acetyltransf_7 Location: 2402-2543 bp Feature: gene Location: 2693-3304 bp Feature: domain Description: VanY Location: 2921-3293 bp Feature: domain Description: VanY Location: 2921 -3293 bp Feature: gene Location: 3348-4844 bp Feature: domain Description: RVT_N Location: 3408-3648 bp Feature: domain Description: RVT_N Location: 3408-3648 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3696-4317 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3696-431 7 bp Feature: domain Description: GIIM Note: maturase Location: 4374-4605 bp Feature: domain Description: GIIM Note: maturase Location: 4374-4605 bp Feature: gene Location: 4949-5191 bp Feature: gene Location: 5286-5513 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Acetyltransf_7 (pfam13508), VanY (pfam02557), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: CACVKW010001582.1 (8857 bp)
Overview 1 RT 1: 145-1201 bp Neighborhood of RT #1 [145, 1201] RVT-GII GIIM Feature: gene Location: 145-327 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 154-238 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 154-2 38 bp Feature: gene Location: 346-765 bp Feature: domain Description: GIIM Note: maturase Location: 352-526 bp Feature: domain Description: GIIM Note: maturase Location: 352 -52 6 bp Feature: gene Location: 920-1201 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: CACVKW010000521.1 (2264 bp)
Overview 1 RT 1: 40-1747 bp Neighborhood of RT #1 [40, 2094] RVT-GII Feature: gene Location: 40-240 bp Feature: gene Location: 361-594 bp Feature: gene Location: 697-2094 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1075-1747 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1075-1747 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: CACVKW010001496.1 (1106 bp)
Overview 1 RT 1: 2-1103 bp Neighborhood of RT #1 [2, 1103] RVT-GII Feature: gene Location: 2-145 bp Feature: gene Location: 266-598 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 287-560 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 287-560 bp Feature: gene Location: 828-1103 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: CACVKW010001565.1 (5767 bp)
Overview 1 RT 1: 1-2693 bp Neighborhood of RT #1 [1, 2693] Y2_Tnp RVT-GII GIIM Feature: gene Location: 1-432 bp Feature: domain Description: Y2_Tnp Location: 4-205 bp Feature: domain Description: Y2_Tnp Location: 4-205 bp Feature: gene Location: 758-2065 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1028-1640 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1028-1640 bp Feature: domain Description: GIIM Note: maturase Location: 1694-1910 bp Feature: domain Description: GIIM Note: maturase Location: 1694-1910 bp Feature: gene Location: 2156-2380 bp Feature: gene Location: 2475-2693 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Y2_Tnp (pfam04986), RVT-GII, GIIM (pfam08388)

Seq: CACVKW010000282.1 (2204 bp)
Overview 1 RT 1: 125-2202 bp Neighborhood of RT #1 [125, 2202] RVT_N RVT-GII GIIM Feature: gene Location: 125-1621 bp Feature: domain Description: RVT_N Location: 185-425 bp Feature: domain Description: RVT_N Location: 185-425 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 473-1094 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 473-1094 bp Feature: domain Description: GIIM Note: maturase Location: 1154-1382 bp Feature: domain Description: GIIM Note: maturase Location: 1154-1382 bp Feature: gene Location: 1457-1930 bp Feature: gene Location: 1993-2202 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: CACVKW010001130.1 (149770 bp)
Overview 1 RT 1: 70294-78811 bp Neighborhood of RT #1 [70294, 78811] TIR_2 AAA_16 WD40 WD40 WD40 WD40 WD40 RVT-UG4 TIR_2 LD_cluster2 Feature: gene Location: 70294-74649 bp Feature: domain Description: TIR_2 Location: 70504-70873 bp Feature: domain Description: TIR_2 Location: 7 0504-7 087 3 bp Feature: domain Description: AAA_16 Location: 70993-71377 bp Feature: domain Description: AAA_16 Location: 7 0993-7 137 7 bp Feature: domain Description: WD40 Location: 72736-73219 bp Feature: domain Description: WD40 Location: 7 27 36-7 3219 bp Feature: domain Description: WD40 Location: 73231-73348 bp Feature: domain Description: WD40 Location: 7 3231-7 3348 bp Feature: domain Description: WD40 Location: 73360-73477 bp Feature: domain Description: WD40 Location: 7 3360-7 347 7 bp Feature: domain Description: WD40 Location: 73486-73600 bp Feature: domain Description: WD40 Location: 7 3486-7 3600 bp Feature: domain Description: WD40 Location: 73714-74482 bp Feature: domain Description: WD40 Location: 7 37 14-7 4482 bp Feature: gene Location: 74939-75598 bp Feature: gene Location: 75755-76021 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 75758-75851 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 7 57 58-7 5851 bp Feature: gene Location: 76149-78272 bp Feature: domain Description: TIR_2 Location: 76722-76971 bp Feature: domain Description: TIR_2 Location: 7 67 22-7 697 1 bp Feature: domain Description: LD_cluster2 Location: 77367-78195 bp Feature: domain Description: LD_cluster2 Location: 7 7 367 -7 8195 bp Feature: gene Location: 78278-78811 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIR_2 (pfam13676), AAA_16 (pfam13191), WD40 (smart00320), RVT-UG4, LD_cluster2 (pfam18163)

Seq: CACVKW010001343.1 (9586 bp)
Overview 1 RT 1: 3984-7407 bp Neighborhood of RT #1 [3984, 7407] RVT-GII GIIM Feature: gene Location: 3984-4562 bp Feature: gene Location: 5179-5415 bp Feature: gene Location: 5481-6761 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5784-6408 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 578 4-6408 bp Feature: domain Description: GIIM Note: maturase Location: 6495-6708 bp Feature: domain Description: GIIM Note: maturase Location: 6495-6708 bp Feature: gene Location: 6969-7187 bp Feature: gene Location: 7195-7407 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)