myRT

myRT report for GCA_902756595.1_Rumen_uncultured_genome_RUG10183

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Seq: CACVRZ010000008.1 (45366 bp)
Overview 1 RT 1: 38186-44639 bp Neighborhood of RT #1 [38186, 44911] Lon_2 HATPase_c_3 RVT-UG15 COG2865 Feature: gene Location: 38186-39619 bp Feature: domain Description: Lon_2 Location: 38222-39590 bp Feature: domain Description: Lon_2 Location: 38222-39590 bp Feature: gene Location: 39644-41620 bp Feature: domain Description: HATPase_c_3 Location: 39704-40082 bp Feature: domain Description: HATPase_c_3 Location: 39704-40082 bp Feature: gene Location: 41703-43223 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 42144-42540 bp Feature: RT Description: RVT-UG1 5 Note: UG1 5 RT Location: 421 44-42540 bp Feature: gene Location: 43262-44911 bp Feature: domain Description: COG2865 Location: 43280-44639 bp Feature: domain Description: COG2865 Location: 43280-44639 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Lon_2 (pfam13337), HATPase_c_3 (pfam13589), RVT-UG15, COG2865 (Predicted transcriptional regulator, contains HTH domain )

Seq: CACVRZ010000019.1 (59452 bp)
Overview 1 RT 1: 44555-54677 bp Neighborhood of RT #1 [44555, 54934] DUF4295 RVT-AbiP2 UvrD_C DUF3883 Feature: gene Location: 44555-44713 bp Feature: domain Description: DUF4295 Location: 44561-44705 bp Feature: domain Description: DUF42 95 Location: 44561-44705 bp Feature: gene Location: 44774-45223 bp Feature: gene Location: 45483-47096 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 45921-46404 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 4592 1-46404 bp Feature: gene Location: 47154-51530 bp Feature: domain Description: UvrD_C Location: 49257-49455 bp Feature: domain Description: UvrD_C Location: 492 57-49455 bp Feature: gene Location: 51599-54934 bp Feature: domain Description: DUF3883 Location: 54458-54677 bp Feature: domain Description: DUF3883 Location: 54458-54677 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4295 (pfam14128), RVT-AbiP2, UvrD_C (pfam13361), DUF3883 (pfam13020)