myRT

myRT report for GCA_902757525.1_Rumen_uncultured_genome_RUG10272

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Seq: CACVVM010000030.1 (14920 bp)
Overview 1 RT 1: 10940-14920 bp Neighborhood of RT #1 [10940, 14919] RVT-AbiP2 SlpA AroC Feature: gene Location: 10940-11299 bp Feature: gene Location: 11891-12025 bp Feature: gene Location: 12212-13897 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 12647-13103 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1 2647-1 31 03 bp Feature: gene Location: 14037-14618 bp Feature: domain Description: SlpA Location: 14040-14529 bp Feature: domain Description: SlpA Location: 1 4040-1 4529 bp Feature: gene Location: 14635-14919 bp Feature: domain Description: AroC Location: 14641-14920 bp Feature: domain Description: AroC Location: 1 4641 -1 4920 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiP2, SlpA (COG1047), AroC (COG0082)

Seq: CACVVM010000028.1 (15667 bp)
Overview 1 RT 1: 233-3843 bp Neighborhood of RT #1 [233, 3869] RVT-UG26 DUF4359 KOG4364 DUF4424 DUF4424 YARHG Feature: gene Location: 233-721 bp Feature: gene Location: 873-2108 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 1074-1692 bp Feature: RT Description: RVT-UG2 6 Note: UG2 6 RT Location: 1074-1692 bp Feature: gene Location: 2178-2765 bp Feature: domain Description: DUF4359 Location: 2223-2499 bp Feature: domain Description: DUF4359 Location: 2 2 2 3-2 499 bp Feature: domain Description: KOG4364 Location: 2499-2757 bp Feature: domain Description: KOG4364 Location: 2 499-2 757 bp Feature: gene Location: 2799-3869 bp Feature: domain Description: DUF4424 Location: 2865-3144 bp Feature: domain Description: DUF442 4 Location: 2 865-3144 bp Feature: domain Description: DUF4424 Location: 3207-3405 bp Feature: domain Description: DUF442 4 Location: 32 07-3405 bp Feature: domain Description: YARHG Location: 3708-3843 bp Feature: domain Description: YARHG Location: 3708-3843 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG26, DUF4359 (pfam14271), KOG4364 (KOG4364, Chromatin assembly factor-I ), DUF4424 (pfam14415), YARHG (pfam13308)

Seq: CACVVM010000134.1 (6737 bp)
Overview 1 RT 1: 5037-6736 bp Neighborhood of RT #1 [5037, 6735] RVT-GII Feature: gene Location: 5037-5195 bp Feature: gene Location: 5209-5775 bp Feature: gene Location: 6295-6735 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6637-6736 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 663 7-673 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII