myRT

myRT report for GCA_902760075.1_Rumen_uncultured_genome_RUG10530

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Seq: CACWFB010000113.1 (6270 bp)
Overview 1 RT 1: 1450-5525 bp Neighborhood of RT #1 [1450, 5725] COG5263 RVT-UG26 Atl1 WrbA Feature: gene Location: 1450-2061 bp Feature: domain Description: COG5263 Location: 1528-1711 bp Feature: domain Description: COG5263 Location: 1 528-1 71 1 bp Feature: gene Location: 2149-3267 bp Feature: gene Location: 3327-4568 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 3543-4161 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 3543-41 61 bp Feature: gene Location: 4797-5105 bp Feature: domain Description: Atl1 Location: 4821-5094 bp Feature: domain Description: Atl1 Location: 4821 -5094 bp Feature: gene Location: 5126-5725 bp Feature: domain Description: WrbA Location: 5141-5525 bp Feature: domain Description: WrbA Location: 51 41 -5525 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG5263 (Glucan-binding domain (YG repeat) ), RVT-UG26, Atl1 (COG3695), WrbA (COG0655)

Seq: CACWFB010000415.1 (6510 bp)
Overview 1 RT 1: 1705-6361 bp Neighborhood of RT #1 [1705, 6507] Cas_Cas6 Cas2_I_II_III RVT-CRISPR cas1_HMARI AbiEi_4 Feature: gene Location: 1705-2421 bp Feature: domain Description: Cas_Cas6 Location: 2008-2416 bp Feature: domain Description: Cas_Cas6 Location: 2 008-2 416 bp Feature: gene Location: 2811-3074 bp Feature: domain Description: Cas2_I_II_III Location: 2820-3042 bp Feature: domain Description: Cas2 _I_II_III Location: 2 82 0-3042 bp Feature: gene Location: 3173-5158 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 3455-4067 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 3455-4067 bp Feature: domain Description: cas1_HMARI Location: 4181-5147 bp Feature: domain Description: cas1_HMARI Location: 4181-5147 bp Feature: gene Location: 5202-5462 bp Feature: gene Location: 6202-6507 bp Feature: domain Description: AbiEi_4 Location: 6217-6361 bp Feature: domain Description: AbiEi_4 Location: 62 17-6361 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas_Cas6 (pfam01881), Cas2_I_II_III (cl11442), RVT-CRISPR, cas1_HMARI (TIGR03641), AbiEi_4 (pfam13338)